RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CBX2Q14781 532 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CCDC85BQ15834 202 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CLUL1Q15846 466 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 BRMS1LQ5PSV4 323 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 ATAT1Q5SQI0 421 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 LRRC38Q5VT99 294 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 EP400NLQ6ZTU2 488 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 GET4Q7L5D6 327 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 POLNQ7Z5Q5 900 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 FAM131BQ86XD5 332 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 MIB1Q86YT6 1006 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CMTM8Q8IZV2 173 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CCDC185Q8N715 623 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 RIN3Q8TB24 985 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 FGF13Q92913 245 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 NTAN1Q96AB6 310 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 PLD4Q96BZ4 506 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 ZSWIM3Q96MP5 696 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CYP2S1Q96SQ9 504 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 NCAPGQ9BPX3 1015 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-227ENST00000486806 ANLNQ9NQW6 1124 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 ARHGEF38Q9NXL2 777 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 GDE1Q9NZC3 331 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CDH7Q9ULB5 785 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 USP18Q9UMW8 372 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 CPQQ9Y646 472 aa9.96□□□□□ -0.82
MCF2L-227ENST00000486806 SYNJ2BP-COX16A0A087WUM0 186 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 SLC12A8A0AV02 714 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 PSTPIP1O43586 416 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 SPOPO43791 374 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 STC2O76061 302 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 MBL2P11226 248 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-227ENST00000486806 FCARP24071 287 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 CTNNA2P26232 953 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 CCR1P32246 355 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 AVPR1AP37288 418 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 AIF1P55008 147 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 TBX4P57082 545 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 COG7P83436 770 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF77Q15935 545 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 ZC3H12AQ5D1E8 599 aaKnown RBP9.95□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF569Q5MCW4 686 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 MEI1Q5TIA1 1274 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 NUGGCQ68CJ6 796 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 TXNRD3NBQ6F5E7 133 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 CC2D1AQ6P1N0 951 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-227ENST00000486806 PSTKQ8IV42 348 aaKnown RBP9.95□□□□□ -0.82
MCF2L-227ENST00000486806 SLC35F6Q8N357 371 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 ZSCAN18Q8TBC5 510 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-227ENST00000486806 TEKT4Q8WW24 435 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 KRT35Q92764 455 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 USP13Q92995 863 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-227ENST00000486806 HLA-CQ95604 372 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 HES6Q96HZ4 224 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 ASB16Q96NS5 453 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 WDR24Q96S15 920 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 NACA2Q9H009 215 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 SLITRK6Q9H5Y7 841 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 TRPV4Q9HBA0 871 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 SMPD4Q9NXE4 827 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.95□□□□□ -0.829e-7■■■■□ 24.5
MCF2L-227ENST00000486806 COX16Q9P0S2 106 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 CCL26Q9Y258 94 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 USTQ9Y2C2 406 aa9.95□□□□□ -0.82
MCF2L-227ENST00000486806 MIF4GDA9UHW6 222 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 LEFTY2O00292 366 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 DDX3YO15523 660 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 MBTPS2O43462 519 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 PRPSAP2O60256 369 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 LATS1O95835 1130 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 SLC2A3P11169 496 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 MSNP26038 577 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 ADRA1BP35368 520 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 MARCKSL1P49006 195 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 PEX5P50542 639 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 KCNQ1P51787 676 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 GNG11P61952 73 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 ETF1P62495 437 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 HADHQ16836 314 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 SMTNL2Q2TAL5 461 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 LEXMQ3ZCV2 418 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 FAM78AQ5JUQ0 283 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 ARTNQ5T4W7 220 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 Q6ZNB5 142 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 SND1Q7KZF4 910 aaKnown RBP eCLIP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 PEX26Q7Z412 305 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 DDX42Q86XP3 938 aaKnown RBP eCLIP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 ARID3BQ8IVW6 561 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 RHOT1Q8IXI2 618 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 UBE2Q2Q8WVN8 375 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 ALG3Q92685 438 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 WBP2Q969T9 261 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 C16orf45Q96MC5 204 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 MYADMQ96S97 322 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 SNRNP25Q9BV90 132 aaKnown RBP9.94□□□□□ -0.82
MCF2L-227ENST00000486806 TLR10Q9BXR5 811 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 TKTL2Q9H0I9 626 aa9.94□□□□□ -0.82
MCF2L-227ENST00000486806 SMG9Q9H0W8 520 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms