RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 GAREM2Q75VX8 874 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 KATNAL2Q8IYT4 538 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 KRT222Q8N1A0 295 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 MMGT1Q8N4V1 131 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 ZNF707Q96C28 371 aaPredicted RBP11.78□□□□□ -0.52
SND1-212ENST00000485871 SLC39A13Q96H72 371 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 PBKQ96KB5 322 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 SNRNP25Q9BV90 132 aaKnown RBP11.78□□□□□ -0.52
SND1-212ENST00000485871 PIGVQ9NUD9 493 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 NUDT5Q9UKK9 219 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 DENND4AQ7Z401 1863 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
SND1-212ENST00000485871 PDE2AO00408 941 aaPredicted RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 KCNK3O14649 394 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 MDM4O15151 490 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 ZRANB2O95218 330 aaKnown RBP eCLIP11.77□□□□□ -0.53
SND1-212ENST00000485871 GLP2RO95838 553 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 IGLV3-27P01718 113 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 HNRNPA1P09651 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
SND1-212ENST00000485871 RARAP10276 462 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 PYGMP11217 842 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 PPP3CCP48454 512 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 NRIP1P48552 1158 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 CXCR3P49682 368 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 DNA2P51530 1060 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 RWDD2BP57060 319 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 DEUP1Q05D60 604 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 HYAL1Q12794 435 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 GPS2Q13227 327 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 ZNF211Q13398 564 aaPredicted RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 NNTQ13423 1086 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 CA9Q16790 459 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 ARTNQ5T4W7 220 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 TMEM184AQ6ZMB5 413 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 RBM23Q86U06 439 aaKnown RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 FAM131BQ86XD5 332 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 CCDC185Q8N715 623 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 UBL4BQ8N7F7 174 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 ADAM32Q8TC27 787 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 TEKT4Q8WW24 435 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 RAPGEF5Q92565 580 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 NTAN1Q96AB6 310 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 CDCA3Q99618 268 aaPredicted RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 HERPUD2Q9BSE4 406 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 ACBD3Q9H3P7 528 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 TLE6Q9H808 572 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 ANKZF1Q9H8Y5 726 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 OLA1Q9NTK5 396 aaKnown RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 ZDHHC7Q9NXF8 308 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 UXTQ9UBK9 157 aaPredicted RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 PCSK1NQ9UHG2 260 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 SFMBT1Q9UHJ3 866 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 TTC7AQ9ULT0 858 aaPredicted RBP11.77□□□□□ -0.53
SND1-212ENST00000485871 FZD10Q9ULW2 581 aa11.77□□□□□ -0.53
SND1-212ENST00000485871 CCL16O15467 120 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 MSI1O43347 362 aaKnown RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 TLR5O60602 858 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 MOSPD3O75425 235 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 TBX18O95935 607 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 F9P00740 461 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 KRT7P08729 469 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 RALAP11233 206 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 GJC1P36383 396 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 FAM193AP78312 1265 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 SCAPQ12770 1279 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 DPYSL2Q16555 572 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 HADHQ16836 314 aaKnown RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 SMTNL2Q2TAL5 461 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 KLHDC10Q6PID8 442 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 ZDHHC14Q8IZN3 488 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 EXD1Q8NHP7 514 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 ACTRT1Q8TDG2 376 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 ACSF2Q96CM8 615 aaPredicted RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 MS4A14Q96JA4 679 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 FCRL2Q96LA5 508 aaPredicted RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 ZNF512Q96ME7 567 aaPredicted RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 MAGEB5Q9BZ81 275 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 PRKD2Q9BZL6 878 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 ZWILCHQ9H900 591 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 TMPRSS4Q9NRS4 437 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 GPATCH2LQ9NWQ4 482 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 DDIT4Q9NX09 232 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 ARHGEF38Q9NXL2 777 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 DDX56Q9NY93 547 aaKnown RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 FAM53CQ9NYF3 392 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
SND1-212ENST00000485871 DNMT3BQ9UBC3 853 aaKnown RBP11.76□□□□□ -0.53
SND1-212ENST00000485871 KIF26AQ9ULI4 1882 aaPredicted RBP11.75□□□□□ -0.53
SND1-212ENST00000485871 C2orf78A6NCI8 922 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 FAM86C2PA6NEL3 165 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 KCNU1A8MYU2 1149 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 COCHO43405 550 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms