RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 CPXM2Q8N436 756 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 C12orf29Q8N999 325 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 PARD3BQ8TEW8 1205 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 IGSF8Q969P0 613 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 SLC2A11Q9BYW1 496 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
PABPC4-215ENST00000484555 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.07□□□□□ -0.32
PABPC4-215ENST00000484555 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-215ENST00000484555 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
PABPC4-215ENST00000484555 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
PABPC4-215ENST00000484555 RPN1P04843 607 aaKnown RBP13.06□□□□□ -0.32
PABPC4-215ENST00000484555 PRKCHP24723 683 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 CASP4P49662 377 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 KIF11P52732 1056 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 NDST1P52848 882 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 COG7P83436 770 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 BIRC3Q13489 604 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 CAMK2GQ13555 558 aaPredicted RBP13.06□□□□□ -0.32
PABPC4-215ENST00000484555 SGSM1Q2NKQ1 1148 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 C10orf120Q5SQS8 335 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 SCARA5Q6ZMJ2 495 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 SCD5Q86SK9 330 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 PDILTQ8N807 584 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 OR2T3Q8NH03 318 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 TMEM174Q8WUU8 243 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 CDK5RAP1Q96SZ6 601 aaKnown RBP13.06□□□□□ -0.32
PABPC4-215ENST00000484555 C6orf106Q9H6K1 298 aaPredicted RBP13.06□□□□□ -0.32
PABPC4-215ENST00000484555 TM9SF3Q9HD45 589 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 NUDT5Q9UKK9 219 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 PCDHGA1Q9Y5H4 931 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 SLCO1B1Q9Y6L6 691 aa13.06□□□□□ -0.32
PABPC4-215ENST00000484555 COL5A1P20908 1838 aaPredicted RBP13.06□□□□□ -0.32
PABPC4-215ENST00000484555 HELZ2Q9BYK8 2649 aaKnown RBP13.05□□□□□ -0.32
PABPC4-215ENST00000484555 LRRIQ3A6PVS8 624 aaPredicted RBP13.05□□□□□ -0.32
PABPC4-215ENST00000484555 STX6O43752 255 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 KALRNO60229 2985 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 DFNA5O60443 496 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 TSPAN3O60637 253 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 EXOC3O60645 756 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 C1QL1O75973 258 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 CYBBP04839 570 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 CDK4P11802 303 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 HLA-EP13747 358 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 PDCP20941 246 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 ACSL1P33121 698 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 EIF2S3P41091 472 aaKnown RBP13.05□□□□□ -0.32
PABPC4-215ENST00000484555 CCT8P50990 548 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 ASIC1P78348 528 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
PABPC4-215ENST00000484555 PDE4CQ08493 712 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 TMEM215Q68D42 235 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 FAM173BQ6P4H8 233 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 DHRS13Q6UX07 377 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 NELFCDQ8IXH7 590 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 FAM217AQ8IXS0 508 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 TAF4BQ92750 862 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 CYFIP2Q96F07 1278 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 USP28Q96RU2 1077 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 C7orf25Q9BPX7 421 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 PRORYQ9H606 182 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 FAM49BQ9NUQ9 324 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 TFIP11Q9UBB9 837 aaKnown RBP13.05□□□□□ -0.32
PABPC4-215ENST00000484555 HMGXB4Q9UGU5 601 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 AGO1Q9UL18 857 aaKnown RBP13.05□□□□□ -0.32
PABPC4-215ENST00000484555 TMEM131Q92545 1883 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 SHROOM3Q8TF72 1996 aa13.05□□□□□ -0.32
PABPC4-215ENST00000484555 H0Y8X5 98 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 PRB1P04280 392 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 EPHX1P07099 455 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 RALAP11233 206 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 TRIM21P19474 475 aaKnown RBP13.04□□□□□ -0.32
PABPC4-215ENST00000484555 CD27P26842 260 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 ADORA2BP29275 332 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 CORO1AP31146 461 aaKnown RBP13.04□□□□□ -0.32
PABPC4-215ENST00000484555 CTSKP43235 329 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 INCA1Q0VD86 236 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 CUL4AQ13619 759 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 KNOP1Q1ED39 458 aaKnown RBP13.04□□□□□ -0.32
PABPC4-215ENST00000484555 INAVAQ3KP66 663 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 ZACNQ401N2 412 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 SERPINA13PQ6UXR4 307 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 FAM124AQ86V42 546 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 ELMO3Q96BJ8 720 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 ORAI3Q9BRQ5 295 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 LHX5Q9H2C1 402 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 FBRSQ9HAH7 460 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 DMAC2Q9NW81 257 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 NAGPAQ9UK23 515 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 CLEC4EQ9ULY5 219 aa13.04□□□□□ -0.32
PABPC4-215ENST00000484555 PLK4O00444 970 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms