RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SORCS3Q9UPU3 1222 aa5.81□□□□□ -1.48
COPA-203ENST00000481040 SSX2IPQ9Y2D8 614 aa5.81□□□□□ -1.48
COPA-203ENST00000481040 SNX14Q9Y5W7 946 aa5.81□□□□□ -1.48
COPA-203ENST00000481040 LYVE1Q9Y5Y7 322 aa5.81□□□□□ -1.48
COPA-203ENST00000481040 NPIPB15A6NHN6 443 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 AGAP5A6NIR3 686 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 MBD3L5A6NJ08 208 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 SH2D7A6NKC9 451 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 DHX16O60231 1041 aaKnown RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 ERAL1O75616 437 aaKnown RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 BEST1O76090 585 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 CCNDBP1O95273 360 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 NR2F1P10589 423 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ACP5P13686 325 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 TNNT1P13805 278 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 CHN1P15882 459 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 KCNA2P16389 499 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 TM4SF1P30408 202 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 GPD2P43304 727 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 NDUFV1P49821 464 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 CDH15P55291 814 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 RBM6P78332 1123 aaKnown RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 EPS8Q12929 822 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 MTAPQ13126 283 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 AAK1Q2M2I8 961 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 HECTD3Q5T447 861 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ANKRD40Q6AI12 368 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 SFRP4Q6FHJ7 346 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 PRPF39Q86UA1 669 aaKnown RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 VSIG1Q86XK7 387 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 TEX11Q8IYF3 940 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ABRAQ8N0Z2 381 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 SYNE4Q8N205 404 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ATRIPQ8WXE1 791 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ST8SIA2Q92186 375 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ELP4Q96EB1 424 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 LCORQ96JN0 433 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 TOX2Q96NM4 488 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 NR1H4Q96RI1 486 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 C17orf80Q9BSJ5 609 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 MROH8Q9H579 483 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ERVK-5Q9HDB9 667 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 SEMA4BQ9NPR2 832 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 FBXO28Q9NVF7 368 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 BEX4Q9NWD9 120 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 HCFC1R1Q9NWW0 138 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 RAB21Q9UL25 225 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 TRPC5Q9UL62 973 aaPredicted RBP5.8□□□□□ -1.48
COPA-203ENST00000481040 NEU2Q9Y3R4 380 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ZNF711Q9Y462 761 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 ENTPD2Q9Y5L3 495 aa5.8□□□□□ -1.48
COPA-203ENST00000481040 NPIPB6E9PJ23 425 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 ETV2O00321 342 aaPredicted RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 TUBB4AP04350 444 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 HLA-DOAP06340 250 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 GLDCP23378 1020 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 OAS2P29728 719 aaKnown RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 CTNNA1P35221 906 aaKnown RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 NNMTP40261 264 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 MTHFSP49914 203 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 ANXA11P50995 505 aaKnown RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 TIRAPP58753 221 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 RAC3P60763 192 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 RPL15P61313 204 aaKnown RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 STK4Q13043 487 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 THOC5Q13769 683 aaKnown RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 CDC37Q16543 378 aaPredicted RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 METTL24Q5JXM2 366 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 DEPDC1Q5TB30 811 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 METRNLQ641Q3 311 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 CREBRFQ8IUR6 639 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 SYT12Q8IV01 421 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 KBTBD2Q8IY47 623 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 TAGAPQ8N103 731 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 CNTROBQ8N137 903 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 METTL25Q8N6Q8 603 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 ZNF366Q8N895 744 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 OVCA2Q8WZ82 227 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 ARRDC3Q96B67 414 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 KIF1BPQ96EK5 621 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 MASTLQ96GX5 879 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 VN1R3Q9BXE9 311 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 FTOQ9C0B1 505 aaKnown RBP eCLIP5.79□□□□□ -1.48
COPA-203ENST00000481040 TTYH1Q9H313 450 aaPredicted RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 NRDE2Q9H7Z3 1164 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 SYNPO2LQ9H987 977 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 KCNK9Q9NPC2 374 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 HECAQ9UBI9 543 aaPredicted RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 STEAP1Q9UHE8 339 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 SERTAD3Q9UJW9 196 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 SARDHQ9UL12 918 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 DRG1Q9Y295 367 aaKnown RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 UBE2J1Q9Y385 318 aaPredicted RBP5.79□□□□□ -1.48
COPA-203ENST00000481040 AATKQ6ZMQ8 1374 aa5.79□□□□□ -1.48
COPA-203ENST00000481040 SPATA31A3Q5VYP0 1347 aa5.78□□□□□ -1.48
COPA-203ENST00000481040 TBC1D3DA0A087WVF3 549 aa5.78□□□□□ -1.48
COPA-203ENST00000481040 TBC1D3IA0A087WXS9 549 aa5.78□□□□□ -1.48
COPA-203ENST00000481040 TBC1D3EA0A087X179 549 aa5.78□□□□□ -1.48
COPA-203ENST00000481040 TBC1D3KA0A087X1G2 549 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms