RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 MFAP3P55082 362 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 OXCT1P55809 520 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 CAMK2GQ13555 558 aaPredicted RBP12.58□□□□□ -0.4
USP11-208ENST00000480104 HECTD3Q5T447 861 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 TDRD10Q5VZ19 366 aaKnown RBP12.58□□□□□ -0.4
USP11-208ENST00000480104 ATCAYQ86WG3 371 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 TMEM86AQ8N2M4 240 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 CCDC168Q8NDH2 2452 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 ERMNQ8TAM6 284 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 MAPK15Q8TD08 544 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 UCMAQ8WVF2 138 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
USP11-208ENST00000480104 SLC27A6Q9Y2P4 619 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 ENTPD2Q9Y5L3 495 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 CPLX1O14810 134 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 FFAR2O15552 330 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 GP1BAP07359 652 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 ITGA2BP08514 1039 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 WT1P19544 449 aaPredicted RBP12.57□□□□□ -0.4
USP11-208ENST00000480104 MLLT3P42568 568 aaPredicted RBP12.57□□□□□ -0.4
USP11-208ENST00000480104 RPS14P62263 151 aaKnown RBP12.57□□□□□ -0.4
USP11-208ENST00000480104 KCNAB2Q13303 367 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 MORC3Q14149 939 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 KCNJ12Q14500 433 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 KIF26BQ2KJY2 2108 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 NCEH1Q6PIU2 408 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 VASH2Q86V25 355 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 ZC3H18Q86VM9 953 aaKnown RBP12.57□□□□□ -0.4
USP11-208ENST00000480104 SLC25A45Q8N413 288 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 OR4C6Q8NH72 309 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 SYT15Q9BQS2 421 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 NTPCRQ9BSD7 190 aaKnown RBP12.57□□□□□ -0.4
USP11-208ENST00000480104 MSTO1Q9BUK6 570 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 C17orf75Q9HAS0 396 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
USP11-208ENST00000480104 A0A1B0GTL3 188 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
USP11-208ENST00000480104 DNTTP04053 509 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 C7P10643 843 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 CDC25AP30304 524 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 PNPLA4P41247 253 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 LIG4P49917 911 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 CYP27A1Q02318 531 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 TTC31Q49AM3 519 aaPredicted RBP12.56□□□□□ -0.4
USP11-208ENST00000480104 FHL5Q5TD97 284 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 HTR3DQ70Z44 454 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 ZNF366Q8N895 744 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 RBBP8NLQ8NC74 664 aaPredicted RBP12.56□□□□□ -0.4
USP11-208ENST00000480104 TNFRSF25Q93038 417 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 GRAMD1AQ96CP6 724 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 SERAC1Q96JX3 654 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 AGXT2Q9BYV1 514 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 CIPCQ9C0C6 399 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 ASB7Q9H672 318 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 CRTAC1Q9NQ79 661 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.56□□□□□ -0.4
USP11-208ENST00000480104 TMEM30AQ9NV96 361 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 KIAA1024Q9UPX6 916 aa12.56□□□□□ -0.4
USP11-208ENST00000480104 A0A0B4J269 797 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 LY6G6EA0A0G2JKS1 128 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 GABRDO14764 452 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 MTSS1O43312 755 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 TGM2P21980 687 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 MUTP22033 750 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 POLR2BP30876 1174 aaKnown RBP12.55□□□□□ -0.4
USP11-208ENST00000480104 SLC5A2P31639 672 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 CCT6AP40227 531 aaKnown RBP12.55□□□□□ -0.4
USP11-208ENST00000480104 LHX1P48742 406 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 CACNA2D1P54289 1103 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 GALCP54803 685 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 ZBTB16Q05516 673 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 HS1BP3Q53T59 392 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 HAUS3Q68CZ6 603 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 ANKS1BQ7Z6G8 1248 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 FBXL16Q8N461 479 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 PDZD8Q8NEN9 1154 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 WDR36Q8NI36 951 aaKnown RBP12.55□□□□□ -0.4
USP11-208ENST00000480104 ARRDC3Q96B67 414 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 JAKMIP1Q96N16 626 aaKnown RBP12.55□□□□□ -0.4
USP11-208ENST00000480104 NACA2Q9H009 215 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 DDX19AQ9NUU7 478 aaKnown RBP12.55□□□□□ -0.4
USP11-208ENST00000480104 UCKL1Q9NWZ5 548 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 U3KQA8 63 aa12.55□□□□□ -0.4
USP11-208ENST00000480104 ANKHD1Q8IWZ3 2542 aaKnown RBP12.55□□□□□ -0.4
USP11-208ENST00000480104 PLS3P13797 630 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 YWHAQP27348 245 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 ACOT2P49753 483 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 TUBP50607 506 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 POLE2P56282 527 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 EVCP57679 992 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 RAD51AP2Q09MP3 1159 aa12.54□□□□□ -0.4
USP11-208ENST00000480104 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms