RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 P3H1Q32P28 736 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 RTP2Q5QGT7 225 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 ACBD5Q5T8D3 534 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-204ENST00000480057 RNASEH2BQ5TBB1 312 aaKnown RBP11.42□□□□□ -0.58
VTI1A-204ENST00000480057 DARS2Q6PI48 645 aaKnown RBP11.42□□□□□ -0.58
VTI1A-204ENST00000480057 PDZD4Q76G19 769 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-204ENST00000480057 TAC4Q86UU9 113 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 IGSF21Q96ID5 467 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 ZNF558Q96NG5 402 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 FAM118BQ9BPY3 351 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 TMEM109Q9BVC6 243 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 HERC2P3Q9BVR0 1158 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 FRMD8Q9BZ67 464 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-204ENST00000480057 WDCPQ9H6R7 721 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 OLA1Q9NTK5 396 aaKnown RBP11.42□□□□□ -0.58
VTI1A-204ENST00000480057 ARHGEF38Q9NXL2 777 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.42□□□□□ -0.58
VTI1A-204ENST00000480057 MAFFQ9ULX9 164 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 ATP8A1Q9Y2Q0 1164 aa11.42□□□□□ -0.58
VTI1A-204ENST00000480057 TRIM43BA6NCK2 446 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 GOLGA6L10A6NI86 522 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 H0YGN5 161 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 H7C0C1 242 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 EEF2KO00418 725 aaKnown RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 EIF3HO15372 352 aaKnown RBP eCLIP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SOD2P04179 222 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SLC2A3P11169 496 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 RAG1P15918 1043 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 GOT1P17174 413 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 RPL22P35268 128 aaKnown RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 ACTN2P35609 894 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 ATP5OP48047 213 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 TUFMP49411 452 aaKnown RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 LBX1P52954 281 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 RABGGTBP53611 331 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 NRG1Q02297 640 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 GABPB1Q06547 395 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 GPS1Q13098 491 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 DPYSQ14117 519 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SLC45A4Q5BKX6 768 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 DENND2CQ68D51 928 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 NCBP2-AS2Q69YL0 99 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 KCNT2Q6UVM3 1135 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 RFX8Q6ZV50 586 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SCD5Q86SK9 330 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 TMEM173Q86WV6 379 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 PPIL6Q8IXY8 311 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SLC39A11Q8N1S5 342 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 BCL7CQ8WUZ0 217 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 UBLCP1Q8WVY7 318 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 TRIM43Q96BQ3 446 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SERPINB11Q96P15 392 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 OLFM3Q96PB7 478 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 QKIQ96PU8 341 aaKnown RBP eCLIP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 HAPLN3Q96S86 360 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 EPAS1Q99814 870 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 FERMT1Q9BQL6 677 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 BRD8Q9H0E9 1235 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 ADAM7Q9H2U9 754 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 IL23AQ9NPF7 189 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 ARHGEF4Q9NR80 690 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 AAASQ9NRG9 546 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 PAK5Q9P286 719 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 SAE1Q9UBE0 346 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-204ENST00000480057 NFS1Q9Y697 457 aa11.41□□□□□ -0.58
VTI1A-204ENST00000480057 MYO16Q9Y6X6 1858 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 DCLK1O15075 740 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 NCAM2O15394 837 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 UPP2O95045 317 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 IFNB1P01574 187 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 YWHAQP27348 245 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 PPM1AP35813 382 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 MAGEA6P43360 314 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 WDR5P61964 334 aaKnown RBP11.4□□□□□ -0.58
VTI1A-204ENST00000480057 CBX1P83916 185 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 DSG1Q02413 1049 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 PDK1Q15118 436 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 TRIP13Q15645 432 aaPredicted RBP11.4□□□□□ -0.58
VTI1A-204ENST00000480057 PSMD5Q16401 504 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 TPGS2Q68CL5 300 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 C1orf228Q6PIY5 440 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 NPNTQ6UXI9 565 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 PPP1R21Q6ZMI0 780 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 DENND5BQ6ZUT9 1274 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 UNC45BQ8IWX7 931 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 GLIS1Q8NBF1 620 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 OVCA2Q8WZ82 227 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 EDEM1Q92611 657 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 TMEM169Q96HH4 297 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 TTC25Q96NG3 672 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 CDK5RAP1Q96SZ6 601 aaKnown RBP11.4□□□□□ -0.58
VTI1A-204ENST00000480057 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 TKTL2Q9H0I9 626 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 EPB41L4BQ9H329 900 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 USP29Q9HBJ7 922 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms