RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
TM9SF4-206ENST00000479591 LRRC19Q9H756 370 aa12.42□□□□□ -0.42
TM9SF4-206ENST00000479591 GPATCH2LQ9NWQ4 482 aa12.42□□□□□ -0.42
TM9SF4-206ENST00000479591 TRPM5Q9NZQ8 1165 aa12.42□□□□□ -0.42
TM9SF4-206ENST00000479591 DPP7Q9UHL4 492 aa12.42□□□□□ -0.42
TM9SF4-206ENST00000479591 TLR6Q9Y2C9 796 aa12.42□□□□□ -0.42
TM9SF4-206ENST00000479591 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
TM9SF4-206ENST00000479591 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 H0YGN5 161 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 H3BRJ5 948 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 TLR5O60602 858 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 CST8O60676 142 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 C8AP07357 584 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 ZFXP17010 805 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 MCM3P25205 808 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 TUBP50607 506 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 CLCN4P51793 760 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 MTA1Q13330 715 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 CAMK1Q14012 370 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 DHX34Q14147 1143 aaKnown RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 LLGL1Q15334 1064 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 ELF2Q15723 593 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 CCNG2Q16589 344 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 CA9Q16790 459 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 PABPC1LQ4VXU2 614 aaKnown RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 PPP6R3Q5H9R7 873 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 C10orf120Q5SQS8 335 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 SPRED2Q7Z698 418 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 ZDHHC14Q8IZN3 488 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 ELMOD1Q8N336 334 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 HDAC7Q8WUI4 952 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 TSC1Q92574 1164 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 ZNF512Q96ME7 567 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 RNF157Q96PX1 679 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 HAPLN3Q96S86 360 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 KCTD15Q96SI1 283 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 HERPUD2Q9BSE4 406 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 LRRC1Q9BTT6 524 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 TKTL2Q9H0I9 626 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 PLEKHA4Q9H4M7 779 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 MTMR10Q9NXD2 777 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 ARHGEF38Q9NXL2 777 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 PCYOX1Q9UHG3 505 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 SFMBT1Q9UHJ3 866 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 FEZ2Q9UHY8 353 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 NR2E1Q9Y466 385 aa12.41□□□□□ -0.42
TM9SF4-206ENST00000479591 PDE4DIPQ5VU43 2346 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 ZNF840PA6NDX5 716 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 APOC4-APOC2K7ER74 178 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 APOC2P02655 101 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 RHOXF2BP0C7M4 288 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 SPATA31D3P0C874 917 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 TGM2P21980 687 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 IL4RP24394 825 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 HTR7P34969 479 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 IRS1P35568 1242 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 ATP5C1P36542 298 aaKnown RBP12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 PBX2P40425 430 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 HCAR3P49019 387 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 TBX4P57082 545 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 RING1Q06587 406 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 EFEMP1Q12805 493 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 TRIP4Q15650 581 aaPredicted RBP12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 HECTD3Q5T447 861 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 ACBD5Q5T8D3 534 aaPredicted RBP12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 PPP2R2DQ66LE6 453 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 DRICH1Q6PGQ1 229 aaPredicted RBP12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 ELMSAN1Q6PJG2 1045 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 CCDC137Q6PK04 289 aaKnown RBP12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 SPATA31D4Q6ZUB0 917 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 GRK7Q8WTQ7 553 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 SLC39A13Q96H72 371 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 RHOXF2Q9BQY4 288 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 OSBPL2Q9H1P3 480 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 NKX2-4Q9H2Z4 354 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 MARCH2Q9P0N8 246 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 RASAL2Q9UJF2 1139 aa12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 HBS1LQ9Y450 684 aaKnown RBP12.4□□□□□ -0.42
TM9SF4-206ENST00000479591 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 KCNU1A8MYU2 1149 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 APOL1O14791 398 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 MSI1O43347 362 aaKnown RBP12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 RAD51CO43502 376 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 CLASP2O75122 1294 aaKnown RBP12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 APOEP02649 317 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 HOXA9P31269 272 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 LMNB2Q03252 620 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 ADCY2Q08462 1091 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 MMRN1Q13201 1228 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 SEMA3BQ13214 749 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 PPM1LQ5SGD2 360 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 SLC9A4Q6AI14 798 aa12.39□□□□□ -0.43
TM9SF4-206ENST00000479591 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms