RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 LXNQ9BS40 222 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 APOL6Q9BWW8 343 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 INO80BQ9C086 356 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 PLEKHA4Q9H4M7 779 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 BARX1Q9HBU1 254 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 GPRC5CQ9NQ84 441 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 FNIP2Q9P278 1114 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 FTSJ1Q9UET6 329 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 KCNJ14Q9UNX9 436 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 NUB1Q9Y5A7 615 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 TCHHQ07283 1943 aa5.07□□□□□ -1.6
CKS1B-207ENST00000477676 SETXQ7Z333 2677 aaKnown RBP5.07□□□□□ -1.6
CKS1B-207ENST00000477676 GCN1Q92616 2671 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 THADAQ6YHU6 1953 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 IGSF10Q6WRI0 2623 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CEP192Q8TEP8 1941 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CCDC196A0A1B0GTZ2 297 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CCL16O15467 120 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 MEFVO15553 781 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 SLITRK3O94933 977 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 NPTXRO95502 500 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 C1RP00736 705 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 GLRA2P23416 452 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 YWHABP31946 246 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 HSPA4P34932 840 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 ARL2P36404 184 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 ITGA1P56199 1179 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 NLRP5P59047 1200 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CYP4A11Q02928 519 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CSTF1Q05048 431 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CTTNQ14247 550 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 MLF2Q15773 248 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 SLC5A9Q2M3M2 681 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 USP41Q3LFD5 358 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 SLC44A4Q53GD3 710 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 SPDYAQ5MJ70 313 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 GTF2IRD2BQ6EKJ0 949 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 MOXD1Q6UVY6 613 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 ARHGEF18Q6ZSZ5 1173 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 GTF2IRD2Q86UP8 949 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CIR1Q86X95 450 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 TRIM59Q8IWR1 403 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 C4orf19Q8IY42 314 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 BLIDQ8IZY5 108 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CCDC148Q8NFR7 591 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 LNX1Q8TBB1 728 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 BICD2Q8TD16 824 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 SREK1Q8WXA9 508 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 PSPC1Q8WXF1 523 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 KLHL6Q8WZ60 621 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 STAMQ92783 540 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CLDN23Q96B33 292 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 WWC2-AS2Q96NR7 200 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 FAM193BQ96PV7 902 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 TMEM209Q96SK2 561 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CSRNP2Q9H175 543 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 LTB4R2Q9NPC1 389 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 SH3GLB2Q9NR46 395 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 ZDHHC7Q9NXF8 308 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 DNMT3BQ9UBC3 853 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 DDX25Q9UHL0 483 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 RALYQ9UKM9 306 aaKnown RBP5.06□□□□□ -1.6
CKS1B-207ENST00000477676 ADAM28Q9UKQ2 775 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 CDH7Q9ULB5 785 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 GIT1Q9Y2X7 761 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 TSC2P49815 1807 aa5.06□□□□□ -1.6
CKS1B-207ENST00000477676 KNL1Q8NG31 2342 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 A0A1B0GUA9 196 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 CASTOR2A6NHX0 329 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 H7BY64 318 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 INO80B-WBP1J3KQ70 363 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 AGRPO00253 132 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 KINO60870 393 aaKnown RBP5.05□□□□□ -1.6
CKS1B-207ENST00000477676 CEBPBP17676 345 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 FCARP24071 287 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 CCR2P41597 374 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 DMWDQ09019 674 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 MTAPQ13126 283 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 KRT32Q14532 448 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 HSP90AA2PQ14568 343 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-207ENST00000477676 UBXN2BQ14CS0 331 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 NONOQ15233 471 aaKnown RBP eCLIP5.05□□□□□ -1.6
CKS1B-207ENST00000477676 EPHA7Q15375 998 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 PSMD5Q16401 504 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 ZNF528Q3MIS6 628 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 HS1BP3Q53T59 392 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 XKR9Q5GH70 373 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 PRR31Q5SQ13 230 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 FAM171A1Q5VUB5 890 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 TANGO2Q6ICL3 276 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 NOTUMQ6P988 496 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 BLOC1S2Q6QNY1 142 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 TRIM48Q8IWZ4 208 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 GPR65Q8IYL9 337 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 ING5Q8WYH8 240 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 TCEAL4Q96EI5 215 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 CCDC51Q96ER9 411 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 DRC1Q96MC2 740 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms