RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RFPL1O75677 317 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 C1QAP02745 245 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 PORP16435 677 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 CNTFP26441 200 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 CD151P48509 253 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 CDK9P50750 372 aaKnown RBP15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 CLDN10P78369 228 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 COG7P83436 770 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 KCNJ11Q14654 390 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 KLHL35Q6PF15 583 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 TRIM67Q6ZTA4 783 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 NIPA1Q7RTP0 329 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 TICAM1Q8IUC6 712 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 DEFB107AQ8IZN7 70 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 TMEM161BQ8NDZ6 487 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 REPS2Q8NFH8 660 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 DLG3Q92796 817 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 CCDC124Q96CT7 223 aaKnown RBP15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 LRRC39Q96DD0 335 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 VPS50Q96JG6 964 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 RTKNQ9BST9 563 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 UBAP1Q9NZ09 502 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 TUBGCP4Q9UGJ1 667 aa15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 CNOT11Q9UKZ1 510 aaKnown RBP15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 ZNF214Q9UL59 606 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-205ENST00000477264 TCRBV7S3A2A0A539 114 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 ADCY3O60266 1144 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 PIAS1O75925 651 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 STK10O94804 968 aaKnown RBP15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 ARP10275 920 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 TCF4P15884 667 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 ZNF23P17027 643 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 NUP107P57740 925 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 RPL7AP62424 266 aaKnown RBP15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 UBXN2AP68543 259 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 GHRHRQ02643 423 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 CUL2Q13617 745 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 TMEM132BQ14DG7 1078 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 CES4AQ5XG92 561 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 DCUN1D2Q6PH85 259 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 PACS1Q6VY07 963 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 TIFABQ6ZNK6 161 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 FASTKD5Q7L8L6 764 aaKnown RBP15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 PPM1NQ8N819 430 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 POMGNT1Q8WZA1 660 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 STK39Q9UEW8 545 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 PCDHB4Q9Y5E5 795 aa15.74■□□□□ 0.11
CLSTN1-205ENST00000477264 H0YJX3 145 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 APOC4-APOC2K7ER74 178 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 HLA-DRAP01903 254 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 APOC2P02655 101 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 CCDC130P13994 396 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 GABRB2P47870 512 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 QARSP47897 775 aaKnown RBP15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 RPS6P62753 249 aaKnown RBP15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 FKBP1BP68106 108 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 DMP1Q13316 513 aaPredicted RBP15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 DPYSL3Q14195 570 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 HADHQ16836 314 aaKnown RBP15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 TKFCQ3LXA3 575 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 ZACNQ401N2 412 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 PDPK2PQ6A1A2 396 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 IGDCC3Q8IVU1 814 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 CTAGE3PQ8IX95 158 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 PPP4R1Q8TF05 950 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 SPIRE2Q8WWL2 714 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 MCEEQ96PE7 176 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 MXRA8Q9BRK3 442 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 TMEM165Q9HC07 324 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 CST8O60676 142 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 CAPNS1P04632 268 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 LRRC8BQ6P9F7 803 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 DENND5BQ6ZUT9 1274 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 C2orf69Q8N8R5 385 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 ACMSDQ8TDX5 336 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 ZNF526Q8TF50 670 aaPredicted RBP15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 PRPF18Q99633 342 aaKnown RBP15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 ZNF518BQ9C0D4 1074 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 VPS28Q9UK41 221 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 DNAJC16Q9Y2G8 782 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 RIPK3Q9Y572 518 aa15.73■□□□□ 0.11
CLSTN1-205ENST00000477264 F8VP50 259 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 FBXO21O94952 628 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 ATP6V1B1P15313 513 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 GRK2P25098 689 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 EIF3EP60228 445 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 PLOD1Q02809 727 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 PSMD6Q15008 389 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 PDCD4Q53EL6 469 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 NCCRP1Q6ZVX7 275 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 HPS6Q86YV9 775 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 POU5F2Q8N7G0 328 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 SHKBP1Q8TBC3 707 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 SYTL5Q8TDW5 730 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 PRPF31Q8WWY3 499 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 CNBD2Q96M20 576 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 SLC2A11Q9BYW1 496 aa15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 INO80BQ9C086 356 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-205ENST00000477264 GBA2Q9HCG7 927 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms