RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 HNRNPABQ99729 332 aaKnown RBP16.55■□□□□ 0.24
VARS2-207ENST00000476162 DUSP16Q9BY84 665 aa16.55■□□□□ 0.24
VARS2-207ENST00000476162 DIAPH2O60879 1101 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 UBOX5O94941 541 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 AMPD1P23109 780 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 LRPAP1P30533 357 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 PDK4Q16654 411 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 SLC45A4Q5BKX6 768 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 LVRNQ6Q4G3 990 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 C17orf99Q6UX52 265 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 STRADAQ7RTN6 431 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 CAND1Q86VP6 1230 aaKnown RBP16.54■□□□□ 0.24
VARS2-207ENST00000476162 CDKL3Q8IVW4 592 aaPredicted RBP16.54■□□□□ 0.24
VARS2-207ENST00000476162 PPP1R10Q96QC0 940 aaKnown RBP16.54■□□□□ 0.24
VARS2-207ENST00000476162 SSU72Q9NP77 194 aaKnown RBP16.54■□□□□ 0.24
VARS2-207ENST00000476162 SLCO1B3Q9NPD5 702 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 MFHAS1Q9Y4C4 1052 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 METTL18O95568 372 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 ZFXP17010 805 aaPredicted RBP16.54■□□□□ 0.24
VARS2-207ENST00000476162 GOT1P17174 413 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 PTPN1P18031 435 aaKnown RBP16.54■□□□□ 0.24
VARS2-207ENST00000476162 NDUFV1P49821 464 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 SULT1E1P49888 294 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 PITX1P78337 314 aaPredicted RBP16.54■□□□□ 0.24
VARS2-207ENST00000476162 SLC25A52Q3SY17 297 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 DCAF6Q58WW2 860 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 HHATQ5VTY9 493 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 KCNT2Q6UVM3 1135 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 PAQR9Q6ZVX9 377 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 RASAL3Q86YV0 1011 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 GRAMD1AQ96CP6 724 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 CFAP36Q96G28 342 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 GTF2IRD1Q9UHL9 959 aa16.54■□□□□ 0.24
VARS2-207ENST00000476162 CFAP73A6NFT4 308 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 C6orf222P0C671 652 aaPredicted RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 RARBP10826 455 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 NPR3P17342 541 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 MAGEA6P43360 314 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 NR2C2P49116 596 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 KIAA0319Q5VV43 1072 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 NCBP2-AS2Q69YL0 99 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 RGS9BPQ6ZS82 235 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 PRPF39Q86UA1 669 aaKnown RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 KLHL23Q8NBE8 558 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 SLC44A1Q8WWI5 657 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 RMDN2Q96LZ7 410 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 APBA2Q99767 749 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 FRMD8Q9BZ67 464 aaPredicted RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 PAPOLBQ9NRJ5 636 aaKnown RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 DTLQ9NZJ0 730 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 PHTF1Q9UMS5 762 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 NR2E3Q9Y5X4 410 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 SPAG6O75602 509 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 ZWINTO95229 277 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 ABL2P42684 1182 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 AFF1P51825 1210 aaKnown RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 MRPS5P82675 430 aaKnown RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 ROR2Q01974 943 aaKnown RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 MGAT5Q09328 741 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 CBLBQ13191 982 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 PTK7Q13308 1070 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 TAF2Q6P1X5 1199 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 TCP10LQ8TDR4 215 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 LRRC8CQ8TDW0 803 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 C12orf65Q9H3J6 166 aaKnown RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 POPDC2Q9HBU9 364 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 TMPRSS4Q9NRS4 437 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 ZC3H7BQ9UGR2 993 aaKnown RBP16.53■□□□□ 0.24
VARS2-207ENST00000476162 FZD10Q9ULW2 581 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 CDY2AQ9Y6F7 541 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 USP3Q9Y6I4 520 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 IKBKGQ9Y6K9 419 aa16.53■□□□□ 0.24
VARS2-207ENST00000476162 SYNJ2BP-COX16A0A087WUM0 186 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 MANSC4A6NHS7 340 aaPredicted RBP16.52■□□□□ 0.24
VARS2-207ENST00000476162 GABRDO14764 452 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 GCATO75600 419 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 IGHA2P01877 340 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 INHBAP08476 426 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 ADRA1DP25100 572 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 MLH1P40692 756 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 FAAP100Q0VG06 881 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 GALNTL6Q49A17 601 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 MDH1BQ5I0G3 518 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 CLEC20AQ6ZU45 233 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 VPS52Q8N1B4 723 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 FITM2Q8N6M3 262 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 BANPQ8N9N5 519 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 GSTCDQ8NEC7 633 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 MED10Q9BTT4 135 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.24
VARS2-207ENST00000476162 COX16Q9P0S2 106 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 ZFATQ9P243 1243 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
VARS2-207ENST00000476162 IQANK1A0A1B0GTG1 560 aa16.51■□□□□ 0.23
VARS2-207ENST00000476162 TNPO2O14787 897 aaKnown RBP16.51■□□□□ 0.23
VARS2-207ENST00000476162 HGSO14964 777 aaPredicted RBP16.51■□□□□ 0.23
VARS2-207ENST00000476162 MT-ND3P03897 115 aa16.51■□□□□ 0.23
VARS2-207ENST00000476162 AKR1A1P14550 325 aa16.51■□□□□ 0.23
VARS2-207ENST00000476162 ARL4AP40617 200 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms