RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DPP6P42658 865 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 GCNT1Q02742 428 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 RPL6Q02878 288 aaKnown RBP15.83■□□□□ 0.12
VARS-223ENST00000474643 BST2Q10589 180 aaKnown RBP15.83■□□□□ 0.12
VARS-223ENST00000474643 E2F5Q15329 346 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 EGFLAMQ63HQ2 1017 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 ARHGAP17Q68EM7 881 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 TRIM65Q6PJ69 517 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 TMEFF1Q8IYR6 380 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 AOPEPQ8N6M6 819 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 UCMAQ8WVF2 138 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 KAT5Q92993 513 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 ERLEC1Q96DZ1 483 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 FUCA2Q9BTY2 467 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 NUSAP1Q9BXS6 441 aaKnown RBP15.83■□□□□ 0.12
VARS-223ENST00000474643 TMEM9BQ9NQ34 198 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 OLA1Q9NTK5 396 aaKnown RBP15.83■□□□□ 0.12
VARS-223ENST00000474643 MARK1Q9P0L2 795 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 A0A0A0MRY4 1105 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 SYCE3A1L190 88 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 XPO1O14980 1071 aaKnown RBP15.82■□□□□ 0.12
VARS-223ENST00000474643 TRIM24O15164 1050 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 AP5Z1O43299 807 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 ADAM23O75077 832 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 ADRB1P08588 477 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 VDRP11473 427 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 USP8P40818 1118 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 P2RY2P41231 377 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 HARS2P49590 506 aaKnown RBP15.82■□□□□ 0.12
VARS-223ENST00000474643 ATXN3P54252 364 aaPredicted RBP15.82■□□□□ 0.12
VARS-223ENST00000474643 ZNF445P59923 1031 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 ADIGQ0VDE8 80 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 ARHGAP44Q17R89 818 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 FKBP15Q5T1M5 1219 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 LYSMD4Q5XG99 296 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 SLC36A4Q6YBV0 504 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 ENOSF1Q7L5Y1 443 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 SCD5Q86SK9 330 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 DENND1CQ8IV53 801 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 PHTF2Q8N3S3 785 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 RBBP8NLQ8NC74 664 aaPredicted RBP15.82■□□□□ 0.12
VARS-223ENST00000474643 DDI1Q8WTU0 396 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 BPIFA3Q9BQP9 254 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 ULBP1Q9BZM6 244 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 UBXN6Q9BZV1 441 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 VPS16Q9H269 839 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 RXFP3Q9NSD7 469 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 KIAA1257Q9ULG3 409 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 USP3Q9Y6I4 520 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 EML5Q05BV3 1969 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 MYOFQ9NZM1 2061 aa15.82■□□□□ 0.12
VARS-223ENST00000474643 SMTNL1A8MU46 457 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 BECN2A8MW95 431 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 SPTBN2O15020 2390 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 NDUFS2O75306 463 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 ZNF217O75362 1048 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 CFIP05156 583 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 PAEPP09466 180 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 SETSIPP0DME0 302 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 LCP1P13796 627 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 HNRNPLP14866 589 aaKnown RBP eCLIP15.81■□□□□ 0.12
VARS-223ENST00000474643 PDE4CQ08493 712 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 LMAN2Q12907 356 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 KRT31Q15323 416 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 UAP1L1Q3KQV9 507 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 MIIPQ5JXC2 388 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 CDKAL1Q5VV42 579 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 GJB7Q6PEY0 223 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 KIAA1324Q6UXG2 1013 aaKnown RBP15.81■□□□□ 0.12
VARS-223ENST00000474643 TOGARAM2Q6ZUX3 1019 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 OLIG1Q8TAK6 271 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 UBA3Q8TBC4 463 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 PLD4Q96BZ4 506 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 CACNA2D2Q9NY47 1150 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 CALCOCO1Q9P1Z2 691 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 APEX2Q9UBZ4 518 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 STARD13Q9Y3M8 1113 aa15.81■□□□□ 0.12
VARS-223ENST00000474643 ATXN2Q99700 1313 aaKnown RBP15.8■□□□□ 0.12
VARS-223ENST00000474643 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 C4orf47A7E2U8 309 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 SYNCRIPO60506 623 aaKnown RBP15.8■□□□□ 0.12
VARS-223ENST00000474643 GABRG2P18507 467 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 PON1P27169 355 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 TRIM61Q5EBN2 209 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 SPDYCQ5MJ68 293 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 LRSAM1Q6UWE0 723 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 Q6ZNB5 142 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 ANKS1BQ7Z6G8 1248 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 SYT12Q8IV01 421 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 ZNF276Q8N554 614 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 UBR7Q8N806 425 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 IPO4Q8TEX9 1081 aaKnown RBP15.8■□□□□ 0.12
VARS-223ENST00000474643 PCMTD1Q96MG8 357 aaPredicted RBP15.8■□□□□ 0.12
VARS-223ENST00000474643 KREMEN1Q96MU8 473 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 CNTNAP3BQ96NU0 1288 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 CNTNAP3Q9BZ76 1288 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 CIPCQ9C0C6 399 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 CYP8B1Q9UNU6 501 aa15.8■□□□□ 0.12
VARS-223ENST00000474643 THADAQ6YHU6 1953 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 M0QYV0 167 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms