RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ARMC7Q9H6L4 198 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TNFSF13BQ9Y275 285 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KNL1Q8NG31 2342 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PDS5AQ29RF7 1337 aaKnown RBP13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 WDR19Q8NEZ3 1342 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 OR6B1O95007 311 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SCRN3Q0VDG4 424 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 C1DQ13901 141 aaKnown RBP13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SLC29A2Q14542 456 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SETMARQ53H47 684 aaPredicted RBP13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 NLNQ9BYT8 704 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ANO9A1A5B4 782 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 O00370 1275 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MTSS1O43312 755 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GLP2RO95838 553 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 EPHX2P34913 555 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KIAA1324Q6UXG2 1013 aaKnown RBP13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM20CQ8IXL6 584 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CRELD1Q96HD1 420 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MYOCQ99972 504 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FICDQ9BVA6 458 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SNX12Q9UMY4 172 aa13.58□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ITGALP20701 1170 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PAICSP22234 425 aaKnown RBP13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KLRC1P26715 233 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TERF2Q15554 542 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TDRPQ86YL5 185 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TMEM159Q96B96 161 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PACSIN1Q9BY11 444 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TLR8Q9NR97 1041 aaKnown RBP13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RHBDL2Q9NX52 303 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CRTAMO95727 393 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 COPAP53621 1224 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ALG11Q2TAA5 492 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KIAA0556O60303 1618 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GHRP10912 638 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ILDR2Q71H61 639 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DNAJB3Q8WWF6 145 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FIG4Q92562 907 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RNF208Q9H0X6 261 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TRPC5OSA6NMA1 111 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SNPHO15079 494 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 VAV1P15498 845 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TRIM16LQ309B1 348 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GRIN3AQ8TCU5 1115 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RSPH1Q8WYR4 309 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CLEC4MQ9H2X3 399 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SETD4Q9NVD3 440 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ALG6Q9Y672 507 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TBX3O15119 743 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 IFNA14P01570 189 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RPL10AP62906 217 aaKnown RBP13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 IL5RAQ01344 420 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ORC2Q13416 577 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CCDC144BQ3MJ40 725 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 COQ7Q99807 217 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KLHL28Q9NXS3 571 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 USP6P35125 1406 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KCNB2Q92953 911 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KLHL41O60662 606 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF189O75820 626 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GCLCP48506 637 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PUDPQ08623 228 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ABRQ12979 859 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PLD1Q13393 1074 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TRAPPC11Q7Z392 1133 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PLEKHH3Q7Z736 793 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PPIL6Q8IXY8 311 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 LPCAT1Q8NF37 534 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CCT8L2Q96SF2 557 aa13.57□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ERMARDQ5T6L9 678 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 C11orf63Q6NUN7 778 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RPTNQ6XPR3 784 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CACTIN-AS1Q8N1I8 211 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GPAMQ9HCL2 828 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RBM12Q9NTZ6 932 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KDM5CP41229 1560 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RAD51CO43502 376 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 INSCQ1MX18 579 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KLHL12Q53G59 568 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GBA2Q9HCG7 927 aaPredicted RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GEMP55040 296 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RBM23Q86U06 439 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ITIH5Q86UX2 942 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM172AQ8WUF8 416 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 IDI2Q9BXS1 227 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 NUDT5Q9UKK9 219 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MTO1Q9Y2Z2 717 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM220BPB1ANY3 271 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms