RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ATP5DP30049 168 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 SERPINB6P35237 376 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 ADRA1BP35368 520 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 HCAR3P49019 387 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 PSEN1P49768 467 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 CCL23P55773 120 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 ARL4CP56559 192 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 TPI1P60174 286 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 MRPL58Q14197 206 aaKnown RBP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 TERF2Q15554 542 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 SLC45A4Q5BKX6 768 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 TTMPQ5BVD1 217 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 BRMS1LQ5PSV4 323 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 SYPL2Q5VXT5 272 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 BSPRYQ5W0U4 402 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 NPNTQ6UXI9 565 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 BHLHA9Q7RTU4 235 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 LRRTM3Q86VH5 581 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 SCN4BQ8IWT1 228 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 PRCCQ92733 491 aaPredicted RBP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 CEP295NLQ96MC4 621 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 SERPINB11Q96P15 392 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 RBM15Q96T37 977 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 KLC2Q9H0B6 622 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 SMOC2Q9H3U7 446 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 C11orf49Q9H6J7 331 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 PPCSQ9HAB8 311 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 ARHGEF4Q9NR80 690 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 TMEM39AQ9NV64 488 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 MTMR10Q9NXD2 777 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 CWC15Q9P013 229 aaKnown RBP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 COX16Q9P0S2 106 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 ADAM21Q9UKJ8 722 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 HEY1Q9Y5J3 304 aa9.68□□□□□ -0.86
SMC1A-205ENST00000469129 TNRC18O15417 2968 aaPredicted RBP9.68□□□□□ -0.86
SMC1A-205ENST00000469129 MIA3Q5JRA6 1907 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 ALPK3Q96L96 1907 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 ABHD14A-ACY1A0A1B0GW23 586 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 TNFRSF10BO14763 440 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 TP73O15350 636 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 KCNN4O15554 427 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 IRAK2O43187 625 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 TTC4O95801 387 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 AMHP03971 560 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 FYNP06241 537 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 GALTP07902 379 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 TSHRP16473 764 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 GOT1P17174 413 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 NR1D1P20393 614 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 PHBP35232 272 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 RPL22P35268 128 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 CHKAP35790 457 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 ALDH7A1P49419 539 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 CXCR3P49682 368 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 GATMP50440 423 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 ATXN1P54253 815 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 GDF10P55107 478 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 RPL10AP62906 217 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 BASP1P80723 227 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 GPR17Q13304 367 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 MTA1Q13330 715 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 SLC29A2Q14542 456 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 PAFAH1B3Q15102 231 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 PDK1Q15118 436 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 HIF1AQ16665 826 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 GLIPR1L2Q4G1C9 344 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 C6orf118Q5T5N4 469 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 NCBP2-AS2Q69YL0 99 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 HEATR6Q6AI08 1181 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 KDM7AQ6ZMT4 941 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 RFX8Q6ZV50 586 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 DEFB128Q7Z7B8 93 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 TAC4Q86UU9 113 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 ZC3H18Q86VM9 953 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 UNC45BQ8IWX7 931 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 NUP93Q8N1F7 819 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 RIBC1Q8N443 379 aaPredicted RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 FAM71DQ8N9W8 422 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 GLIS1Q8NBF1 620 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 DQX1Q8TE96 717 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 TFB1MQ8WVM0 346 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 NDRG1Q92597 394 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 RNF34Q969K3 372 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 PGM2Q96G03 612 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 OLFM3Q96PB7 478 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 TTPALQ9BTX7 342 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 BRD8Q9H0E9 1235 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 EPB41L4BQ9H329 900 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 CENPHQ9H3R5 247 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 SEMA4AQ9H3S1 761 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 WDCPQ9H6R7 721 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 WDR6Q9NNW5 1121 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 AAASQ9NRG9 546 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 OLA1Q9NTK5 396 aaKnown RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 NINJ2Q9NZG7 142 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 SAE1Q9UBE0 346 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms