RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 C10orf120Q5SQS8 335 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 KIAA1328Q86T90 577 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 TAC4Q86UU9 113 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 ARID3BQ8IVW6 561 aaPredicted RBP11.73□□□□□ -0.53
MSH5-214ENST00000468602 CCAR2Q8N163 923 aaKnown RBP11.73□□□□□ -0.53
MSH5-214ENST00000468602 EMC1Q8N766 993 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 ARL14EPQ8N8R7 260 aaPredicted RBP11.73□□□□□ -0.53
MSH5-214ENST00000468602 MAB21L3Q8N8X9 362 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 TEKT4Q8WW24 435 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 ATXN2LQ8WWM7 1075 aaKnown RBP11.73□□□□□ -0.53
MSH5-214ENST00000468602 EDEM1Q92611 657 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 USP13Q92995 863 aaPredicted RBP11.73□□□□□ -0.53
MSH5-214ENST00000468602 CD101Q93033 1021 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 ELSPBP1Q96BH3 223 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 CFAP57Q96MR6 1250 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
MSH5-214ENST00000468602 SLC22A12Q96S37 553 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 HAPLN3Q96S86 360 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 MYADMQ96S97 322 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 TRIM7Q9C029 511 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 CALCOCO1Q9P1Z2 691 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 ZKSCAN5Q9Y2L8 839 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 NR2E1Q9Y466 385 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 DUSP10Q9Y6W6 482 aa11.73□□□□□ -0.53
MSH5-214ENST00000468602 LOC730098B7Z3J9 87 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 H3BQ06 376 aaPredicted RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 M0QYT0 321 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 GRAP2O75791 330 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 STC2O76061 302 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 RNF8O76064 485 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 PSMA2P25787 234 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 CCR1P32246 355 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 TBX4P57082 545 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 BOLA3Q53S33 107 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 FAM78AQ5JUQ0 283 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 ARTNQ5T4W7 220 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 STXBP5Q5T5C0 1151 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 CYP4V2Q6ZWL3 525 aaPredicted RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 MTSS1LQ765P7 747 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 RSRC2Q7L4I2 434 aaKnown RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 SYCE1Q8N0S2 351 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 CPXM2Q8N436 756 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 TRIM58Q8NG06 486 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 ACSF2Q96CM8 615 aaPredicted RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 BTN2A3PQ96KV6 586 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 ZSWIM3Q96MP5 696 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 OSBPL2Q9H1P3 480 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 TRPV5Q9NQA5 729 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 PIGVQ9NUD9 493 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
MSH5-214ENST00000468602 IGSF9Q9P2J2 1179 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 PYCARDQ9ULZ3 195 aa11.72□□□□□ -0.53
MSH5-214ENST00000468602 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 TNFRSF10AO00220 468 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 BUB1BO60566 1050 aaPredicted RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 GJB6O95452 261 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 ABL1P00519 1130 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 TUBB4AP04350 444 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 CKMP06732 381 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 GJA1P17302 382 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 TFE3P19532 575 aaPredicted RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 HOXC13P31276 330 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 ADRA1BP35368 520 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 HCAR3P49019 387 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 SULT1E1P49888 294 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 MLLT6P55198 1093 aaPredicted RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 RNASE9P60153 205 aaKnown RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 SLC25A11Q02978 314 aaKnown RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 DEUP1Q05D60 604 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 EFEMP1Q12805 493 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 SEMA3BQ13214 749 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 HTR4Q13639 388 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 ARHGAP29Q52LW3 1261 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 MPP7Q5T2T1 576 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 PTCRAQ6ISU1 281 aaPredicted RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 SND1Q7KZF4 910 aaKnown RBP eCLIP11.71□□□□□ -0.53
MSH5-214ENST00000468602 MFSD6LQ8IWD5 586 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 FAM172AQ8WUF8 416 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 CYP2S1Q96SQ9 504 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 WDCPQ9H6R7 721 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 PRDM16Q9HAZ2 1276 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 DDIT4Q9NX09 232 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 THEGQ9P2T0 379 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 SFMBT1Q9UHJ3 866 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
MSH5-214ENST00000468602 CPQQ9Y646 472 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 ALG6Q9Y672 507 aa11.71□□□□□ -0.53
MSH5-214ENST00000468602 IGLV3-10A0A075B6K4 115 aa11.7□□□□□ -0.54
MSH5-214ENST00000468602 A0A0U1RQJ8 604 aa11.7□□□□□ -0.54
MSH5-214ENST00000468602 SLC12A8A0AV02 714 aa11.7□□□□□ -0.54
MSH5-214ENST00000468602 GRID2IPA4D2P6 1211 aa11.7□□□□□ -0.54
MSH5-214ENST00000468602 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
MSH5-214ENST00000468602 I6L893 689 aaPredicted RBP11.7□□□□□ -0.54
MSH5-214ENST00000468602 LEFTY2O00292 366 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms