RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SSTR3P32745 418 aaPredicted RBP10.44□□□□□ -0.74
PMF1-204ENST00000466489 ZNF132P52740 706 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 EPHA5P54756 1037 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 GALCP54803 685 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 DHX9Q08211 1270 aaKnown RBP10.44□□□□□ -0.74
PMF1-204ENST00000466489 IFRD2Q12894 506 aaPredicted RBP10.44□□□□□ -0.74
PMF1-204ENST00000466489 CNGA2Q16280 664 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 CCDC142Q17RM4 750 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 LACTB2Q53H82 288 aaPredicted RBP10.44□□□□□ -0.74
PMF1-204ENST00000466489 GJB7Q6PEY0 223 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 LCLAT1Q6UWP7 414 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 TRIM72Q6ZMU5 477 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 KLHL7Q8IXQ5 586 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 STKLD1Q8NE28 680 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 IPO4Q8TEX9 1081 aaKnown RBP10.44□□□□□ -0.74
PMF1-204ENST00000466489 UBLCP1Q8WVY7 318 aaPredicted RBP10.44□□□□□ -0.74
PMF1-204ENST00000466489 VCPIP1Q96JH7 1222 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 MYRFLQ96LU7 910 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 AGPAT1Q99943 283 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 ATXN3LQ9H3M9 355 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 CCDC134Q9H6E4 229 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 LRRC4Q9HBW1 653 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 CSNK1G1Q9HCP0 422 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 MRPL47Q9HD33 250 aaKnown RBP10.44□□□□□ -0.74
PMF1-204ENST00000466489 HCFC1R1Q9NWW0 138 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 GDE1Q9NZC3 331 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 TRPM5Q9NZQ8 1165 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 WHRNQ9P202 907 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.44□□□□□ -0.743e-8■■■■■ 71.2
PMF1-204ENST00000466489 DOCK8Q8NF50 2099 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 OBSL1O75147 1896 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 CUL9Q8IWT3 2517 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 REV3LO60673 3130 aa10.44□□□□□ -0.74
PMF1-204ENST00000466489 COL6A3P12111 3177 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 NUP210Q8TEM1 1887 aaPredicted RBP10.43□□□□□ -0.74
PMF1-204ENST00000466489 SOBPA7XYQ1 873 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 E7EVH7 732 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 SMAPO00193 183 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 O00370 1275 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 FOXN3O00409 490 aaPredicted RBP10.43□□□□□ -0.74
PMF1-204ENST00000466489 XPO1O14980 1071 aaKnown RBP10.43□□□□□ -0.74
PMF1-204ENST00000466489 RGS16O15492 202 aaPredicted RBP10.43□□□□□ -0.74
PMF1-204ENST00000466489 CYP26A1O43174 497 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 PHF2O75151 1096 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 ATP5HO75947 161 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 KRT14P02533 472 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 BRD2P25440 801 aaKnown RBP10.43□□□□□ -0.74
PMF1-204ENST00000466489 GPR15P49685 360 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 PMS2P54278 862 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 RWDD2BP57060 319 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 ACTN3Q08043 901 aaPredicted RBP10.43□□□□□ -0.74
PMF1-204ENST00000466489 PTP4A2Q12974 167 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 KRT71Q3SY84 523 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 SDHAF4Q5VUM1 108 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 NAA35Q5VZE5 725 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 DUPD1Q68J44 220 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 CLEC20AQ6ZU45 233 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 MTSS1LQ765P7 747 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 TMC3Q7Z5M5 1100 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 FAM71AQ8IYT1 594 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 SIX6OS1Q8N1H7 587 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 ARHGAP18Q8N392 663 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 GPR152Q8TDT2 470 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 ZNF473Q8WTR7 871 aaKnown RBP10.43□□□□□ -0.74
PMF1-204ENST00000466489 ZNF606Q8WXB4 792 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 OVCA2Q8WZ82 227 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 FBXO32Q969P5 355 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 CHMP6Q96FZ7 201 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 MS4A14Q96JA4 679 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 SERPINB12Q96P63 405 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 KCNK16Q96T55 309 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 MIS12Q9H081 205 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 SALL4Q9UJQ4 1053 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 CDH7Q9ULB5 785 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 EYSQ5T1H1 3165 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 NOTCH4Q99466 2003 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 NCOR1O75376 2440 aa10.43□□□□□ -0.74
PMF1-204ENST00000466489 A0A1W2PRU2 124 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 C5orf60A6NFR6 353 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 DDX3XO00571 662 aaKnown RBP eCLIP10.42□□□□□ -0.74
PMF1-204ENST00000466489 TCEA3O75764 348 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 BMP1P13497 986 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 EZRP15311 586 aaKnown RBP10.42□□□□□ -0.74
PMF1-204ENST00000466489 PFKLP17858 780 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 SP100P23497 879 aaPredicted RBP10.42□□□□□ -0.74
PMF1-204ENST00000466489 CTNNA2P26232 953 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 AVPR1AP37288 418 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 ACADSBP45954 432 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 PSEN1P49768 467 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 SLC5A3P53794 718 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 NTHL1P78549 312 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 CYP1B1Q16678 543 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 TTMPQ5BVD1 217 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 PAQR9Q6ZVX9 377 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 ZDHHC14Q8IZN3 488 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 RIBC1Q8N443 379 aaPredicted RBP10.42□□□□□ -0.74
PMF1-204ENST00000466489 C12orf50Q8NA57 414 aaPredicted RBP10.42□□□□□ -0.74
PMF1-204ENST00000466489 CCDC197Q8NCU1 140 aa10.42□□□□□ -0.74
PMF1-204ENST00000466489 CFAP61Q8NHU2 1237 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms