RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 IRF2BPLQ9H1B7 796 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 C2orf42Q9NWW7 574 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 ATG2BQ96BY7 2078 aa17.76■□□□□ 0.43
VPS52-215ENST00000464425 ANTXRLA6NF34 631 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 RNF40O75150 1001 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 TPM1P09493 284 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 SP9P0CG40 484 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 TYRP14679 529 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 CASP14P31944 242 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 CDH5P33151 784 aaPredicted RBP17.75■□□□□ 0.43
VPS52-215ENST00000464425 SEC13P55735 322 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 TBX4P57082 545 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 CDR2Q01850 454 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 KDSRQ06136 332 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 TBX2Q13207 712 aaPredicted RBP17.75■□□□□ 0.43
VPS52-215ENST00000464425 C2CD6Q53TS8 623 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 EFHC1Q5JVL4 640 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 SFMBT2Q5VUG0 894 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 NAA35Q5VZE5 725 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 PKN3Q6P5Z2 889 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 ERICH1Q86X53 443 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 SPEM1Q8N4L4 309 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 CPLX3Q8WVH0 158 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 PHOX2BQ99453 314 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 TRIM62Q9BVG3 475 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 GRPEL1Q9HAV7 217 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 POPDC2Q9HBU9 364 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 ARHGEF4Q9NR80 690 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 PLK2Q9NYY3 685 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 WDR35Q9P2L0 1181 aa17.75■□□□□ 0.43
VPS52-215ENST00000464425 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.74■□□□□ 0.43
VPS52-215ENST00000464425 K7EQS6 105 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 TRIM24O15164 1050 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 TULP3O75386 442 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 KAT7O95251 611 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 ADCY5O95622 1261 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 LSM8O95777 96 aaKnown RBP17.74■□□□□ 0.43
VPS52-215ENST00000464425 APODP05090 189 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 CDC25BP30305 580 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 CHKAP35790 457 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 CXCL12P48061 93 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 CCR3P51677 355 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 FMO1Q01740 532 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 SLC6A3Q01959 620 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 ARID5BQ14865 1188 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 FBXO43Q4G163 708 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 DCAF6Q58WW2 860 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 OLFML1Q6UWY5 402 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 BEND5Q7L4P6 421 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 TAC4Q86UU9 113 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 ETFBKMTQ8IXQ9 262 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 DEFB106AQ8N104 65 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 P2RY11Q96G91 374 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 IER2Q9BTL4 223 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 POLR3BQ9NW08 1133 aaPredicted RBP17.74■□□□□ 0.43
VPS52-215ENST00000464425 MARK1Q9P0L2 795 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 DEC1Q9P2X7 70 aa17.74■□□□□ 0.43
VPS52-215ENST00000464425 TSPAN3O60637 253 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 HSF2BPO75031 334 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 GLI1P08151 1106 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 HNRNPH3P31942 346 aaKnown RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 EIF2DP41214 584 aaKnown RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 PRKCIP41743 596 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 GRIA2P42262 883 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 RNASE9P60153 205 aaKnown RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 NOMO3P69849 1222 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 PITX1P78337 314 aaPredicted RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 C2orf27AQ580R0 203 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 MAMSTRQ6ZN01 415 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 TOGARAM2Q6ZUX3 1019 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 TMC6Q7Z403 805 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 UNC45BQ8IWX7 931 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 RPLP0P6Q8NHW5 317 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 C18orf8Q96DM3 657 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 SERPINB11Q96P15 392 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 SLC2A13Q96QE2 648 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 XPO6Q96QU8 1125 aaKnown RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 PCDHB18PQ96TA0 734 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 PRMT8Q9NR22 394 aaPredicted RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 DNAJC17Q9NVM6 304 aaKnown RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 ASNSD1Q9NWL6 643 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 FBXO4Q9UKT5 387 aa17.73■□□□□ 0.43
VPS52-215ENST00000464425 BZW2Q9Y6E2 419 aaKnown RBP17.73■□□□□ 0.43
VPS52-215ENST00000464425 SYNJ2BP-COX16A0A087WUM0 186 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 GOLGA6L7A0A1B0GV03 622 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 TBC1D3BA6NDS4 549 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 ATG13O75143 517 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 TRUB2O95900 331 aaKnown RBP17.72■□□□□ 0.43
VPS52-215ENST00000464425 IGLV3-27P01718 113 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 CYP1A1P04798 512 aaPredicted RBP17.72■□□□□ 0.43
VPS52-215ENST00000464425 HOXC13P31276 330 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 PLA2G5P39877 138 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 GABRB2P47870 512 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 CDK17Q00537 523 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 ASIC2Q16515 512 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 EMC10Q5UCC4 262 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 FYB2Q5VWT5 728 aa17.72■□□□□ 0.43
VPS52-215ENST00000464425 NUGGCQ68CJ6 796 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms