RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 CCDC122Q5T0U0 273 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 PLEKHA7Q6IQ23 1121 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 ALKBH5Q6P6C2 394 aaKnown RBP19.72■□□□□ 0.75
LMNB1-204ENST00000463908 BNIPLQ7Z465 357 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 VPS36Q86VN1 386 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 CSGALNACT1Q8TDX6 532 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 RXFP2Q8WXD0 754 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 P2RY11Q96G91 374 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 SERPINB11Q96P15 392 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 GRPEL1Q9HAV7 217 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 LSM7Q9UK45 103 aaKnown RBP19.72■□□□□ 0.75
LMNB1-204ENST00000463908 FBXL21Q9UKT6 434 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 TLR6Q9Y2C9 796 aa19.72■□□□□ 0.75
LMNB1-204ENST00000463908 COL4A3Q01955 1670 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 COL4A2P08572 1712 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 C2CD4BA6NLJ0 364 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 M0QYT0 321 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 ATMINO43313 823 aaPredicted RBP19.71■□□□□ 0.75
LMNB1-204ENST00000463908 PDGFBP01127 241 aaPredicted RBP19.71■□□□□ 0.75
LMNB1-204ENST00000463908 MLLT6P55198 1093 aaPredicted RBP19.71■□□□□ 0.75
LMNB1-204ENST00000463908 RPL7AP62424 266 aaKnown RBP19.71■□□□□ 0.75
LMNB1-204ENST00000463908 NNTQ13423 1086 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 MAMLD1Q13495 774 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 DHCR24Q15392 516 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 SLC18A3Q16572 532 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 SLC25A52Q3SY17 297 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 CCDC14Q49A88 953 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 TMEM25Q86YD3 366 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 SIX5Q8N196 739 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 SPC24Q8NBT2 197 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 OTUB2Q96DC9 234 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 CFAP57Q96MR6 1250 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 TBCBQ99426 244 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 DCLK3Q9C098 648 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 ARHGEF3Q9NR81 526 aa19.71■□□□□ 0.75
LMNB1-204ENST00000463908 GOLGA6L3A6NEY3 463 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 TMEM221A6NGB7 291 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 M0R296 226 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 ENDOD1O94919 500 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 CYP17A1P05093 508 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 HARS2P49590 506 aaKnown RBP19.7■□□□□ 0.74
LMNB1-204ENST00000463908 STARD6P59095 220 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 MLF2Q15773 248 aaPredicted RBP19.7■□□□□ 0.74
LMNB1-204ENST00000463908 RAB6CQ53S08 254 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 SH3PXD2AQ5TCZ1 1133 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 DNAJC24Q6P3W2 148 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.7■□□□□ 0.74
LMNB1-204ENST00000463908 ATP2A3Q93084 1043 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 AZIN2Q96A70 460 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 PGAP3Q96FM1 320 aaPredicted RBP19.7■□□□□ 0.74
LMNB1-204ENST00000463908 PANX2Q96RD6 677 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 SELENOOQ9BVL4 669 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 RAB6CQ9H0N0 254 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 PIGVQ9NUD9 493 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 DDIT4Q9NX09 232 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 RRN3Q9NYV6 651 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 IMPACTQ9P2X3 320 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 CNOT8Q9UFF9 292 aaKnown RBP19.7■□□□□ 0.74
LMNB1-204ENST00000463908 STOML2Q9UJZ1 356 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 ZNF510Q9Y2H8 683 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 PIAS3Q9Y6X2 628 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 TRIOO75962 3097 aa19.7■□□□□ 0.74
LMNB1-204ENST00000463908 SYNJ2BP-COX16A0A087WUM0 186 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 GOLGA6L7A0A1B0GV03 622 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 KCNU1A8MYU2 1149 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 AKR1B10O60218 316 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 NFATC1O95644 943 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 GLULP15104 373 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 PDGFRAP16234 1089 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 CD72P21854 359 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 FECHP22830 423 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 GBP1P32455 592 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 GJA4P35212 333 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 SULT1E1P49888 294 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 ATXN1P54253 815 aaKnown RBP19.69■□□□□ 0.74
LMNB1-204ENST00000463908 OGDHQ02218 1023 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 PRKCQQ04759 706 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 NME3Q13232 169 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 LY6G5CQ5SRR4 150 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 TXNDC11Q6PKC3 985 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 UNC45BQ8IWX7 931 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 FAM217AQ8IXS0 508 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 CPA6Q8N4T0 437 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 CENPIQ92674 756 aaPredicted RBP19.69■□□□□ 0.74
LMNB1-204ENST00000463908 CCDC42Q96M95 316 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 THAP2Q9H0W7 228 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 C8orf33Q9H7E9 229 aaPredicted RBP19.69■□□□□ 0.74
LMNB1-204ENST00000463908 FAM204AQ9H8W3 233 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 ANLNQ9NQW6 1124 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 SPHK2Q9NRA0 654 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 SPTLC3Q9NUV7 552 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 PARVAQ9NVD7 372 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.69■□□□□ 0.74
LMNB1-204ENST00000463908 COX16Q9P0S2 106 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 XPO7Q9UIA9 1087 aaKnown RBP19.69■□□□□ 0.74
LMNB1-204ENST00000463908 STAP1Q9ULZ2 295 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 ZNF318Q5VUA4 2279 aa19.69■□□□□ 0.74
LMNB1-204ENST00000463908 SPECC1L-ADORA2AF8WAN1 911 aa19.68■□□□□ 0.74
LMNB1-204ENST00000463908 I6L893 689 aaPredicted RBP19.68■□□□□ 0.74
LMNB1-204ENST00000463908 GFRA2O00451 464 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms