RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TCERG1LQ5VWI1 586 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 RBM43Q6ZSC3 357 aaKnown RBP8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 TOGARAM2Q6ZUX3 1019 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 GPRIN1Q7Z2K8 1008 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 TRIM59Q8IWR1 403 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 DEFB119Q8N690 84 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 UBR7Q8N806 425 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 FBXL13Q8NEE6 735 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 KCNV2Q8TDN2 545 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 SMARCD1Q96GM5 515 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 GBP4Q96PP9 640 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 ARID3AQ99856 593 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 GABRG3Q99928 467 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC6A17Q9H1V8 727 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 CSNK1G1Q9HCP0 422 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 DMAP1Q9NPF5 467 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 OSER1Q9NX31 292 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 RAB20Q9NX57 234 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 MARK1Q9P0L2 795 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 DEC1Q9P2X7 70 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 ARMCX3Q9UH62 379 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 CHORDC1Q9UHD1 332 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 RWDD2AQ9UIY3 292 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 MSRB2Q9Y3D2 182 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 STARD13Q9Y3M8 1113 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 KNTC1P50748 2209 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
CDC42BPA-210ENST00000462553 ATP8B3O60423 1300 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 BICDL2A1A5D9 508 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 FAM221BA6H8Z2 402 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 TBC1D3BA6NDS4 549 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 PRRT4C9JH25 899 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 HHLA1C9JL84 531 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 PMM2O15305 246 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 AP5Z1O43299 807 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 STX10O60499 249 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 TLR5O60602 858 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 AP1G2O75843 785 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 CLSTN1O94985 981 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 TBX18O95935 607 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 SERPINF2P08697 491 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 P4HA1P13674 534 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 CD59P13987 128 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 NTSR1P30989 418 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 FMO5P49326 533 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 SIM1P81133 766 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 ZNF33AQ06730 810 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 BYSLQ13895 437 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 COL9A2Q14055 689 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 DUOXA1Q1HG43 343 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 ANO4Q32M45 955 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 GRAMD4Q6IC98 578 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 HTR3DQ70Z44 454 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 TRMT11Q7Z4G4 463 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 ACOT1Q86TX2 421 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 UNC93AQ86WB7 457 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 IRF2BP1Q8IU81 584 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 CRYBG2Q8N1P7 616 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 PGBD3Q8N328 593 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 MINDY1Q8N5J2 469 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 C12orf29Q8N999 325 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 LMO3Q8TAP4 145 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC2A14Q8TDB8 520 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 IPO4Q8TEX9 1081 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 TATDN2Q93075 761 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 ERLEC1Q96DZ1 483 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 HSPA12BQ96MM6 686 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 KLF16Q9BXK1 252 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 SRRTQ9BXP5 876 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 MFRPQ9BY79 579 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 CYP3A43Q9HB55 503 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 METTL14Q9HCE5 456 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 CYLDQ9NQC7 956 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC6A14Q9UN76 642 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 CYP8B1Q9UNU6 501 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 SH3BP1Q9Y3L3 701 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 RAD54BQ9Y620 910 aa8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 URB1O60287 2271 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-210ENST00000462553 ASXL3Q9C0F0 2248 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 ASH1LQ9NR48 2969 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 NEDD8-MDP1E9PL57 170 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 TAF4O00268 1085 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 MDM4O15151 490 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 CYP26A1O43174 497 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 CISD3P0C7P0 127 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 TYRP14679 529 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 RING1Q06587 406 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 CCDC40Q4G0X9 1142 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 BTBD8Q5XKL5 378 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLC36A4Q6YBV0 504 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 Q6ZNB5 142 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 CLEC20AQ6ZU45 233 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 RAB44Q7Z6P3 723 aaPredicted RBP8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 MLKLQ8NB16 471 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 CEP76Q8TAP6 659 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 FAXDC2Q96IV6 333 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 TNIP3Q96KP6 325 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms