RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 NTHL1P78549 312 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 CCZ1BP86790 482 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 CCZ1P86791 482 aaPredicted RBP11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 NR1H3Q13133 447 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 NME3Q13232 169 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC5A9Q2M3M2 681 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 PREPLQ4J6C6 727 aaPredicted RBP11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 BOLA3Q53S33 107 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 C2CD6Q53TS8 623 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 TMEM150AQ86TG1 271 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 PSTKQ8IV42 348 aaKnown RBP11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 NIPA2Q8N8Q9 360 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 ITFG1Q8TB96 612 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 BPIFB1Q8TDL5 484 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 CLEC4CQ8WTT0 213 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 ING5Q8WYH8 240 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 NT5C3BQ969T7 300 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 TCEAL4Q96EI5 215 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 BTN2A3PQ96KV6 586 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 ASB16Q96NS5 453 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 TBCBQ99426 244 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 NPY6RQ99463 290 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 CPQQ9Y646 472 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 IRAK2O43187 625 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 TADA3O75528 432 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 ENDOD1O94919 500 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 CYBBP04839 570 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 KRT7P08729 469 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 GJA1P17302 382 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 PSMC3P17980 439 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 FLT3P36888 993 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 CETN2P41208 172 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 CCR2P41597 374 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 ATP11AP98196 1134 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 PFKPQ01813 784 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 PDGFRLQ15198 375 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 EFHC2Q5JST6 749 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 C1orf228Q6PIY5 440 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 LRRC31Q6UY01 552 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 BHLHA9Q7RTU4 235 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 MAP7D3Q8IWC1 876 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 ADHFE1Q8IWW8 467 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 TRIM58Q8NG06 486 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 KIAA1524Q8TCG1 905 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 RETREG1Q9H6L5 497 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 TJP2Q9UDY2 1190 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 PPP2R2CQ9Y2T4 447 aa11.46□□□□□ -0.57
SMNDC1-203ENST00000460483 CHD7Q9P2D1 2997 aa11.46□□□□□ -0.58
SMNDC1-203ENST00000460483 TCRBV5S1A1TA0A578 114 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 ZNF263O14978 683 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 SPOPO43791 374 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 KIF5CO60282 957 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 MOSPD3O75425 235 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 PROSCO94903 275 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 FYNP06241 537 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 HTR7P34969 479 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 SSR1P43307 286 aaKnown RBP11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 IFNAR2P48551 515 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 CXCR3P49682 368 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 RPL7AP62424 266 aaKnown RBP11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 MTF1Q14872 753 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 E2F5Q15329 346 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 TAF5Q15542 800 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 CDO1Q16878 200 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 CCDC14Q49A88 953 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 FAM78AQ5JUQ0 283 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 ZFYVE27Q5T4F4 411 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 SYPL2Q5VXT5 272 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 NUDT18Q6ZVK8 323 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 HFE2Q6ZVN8 426 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 HTR3DQ70Z44 454 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 PHLDB2Q86SQ0 1253 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 TAC4Q86UU9 113 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 MFSD6LQ8IWD5 586 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 EMC1Q8N766 993 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 ACRBPQ8NEB7 543 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 OLIG1Q8TAK6 271 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 SH3RF2Q8TEC5 729 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 NDRG1Q92597 394 aaKnown RBP11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 CENPIQ92674 756 aaPredicted RBP11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 IRF7Q92985 503 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 NTAN1Q96AB6 310 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 CFAP57Q96MR6 1250 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 ASB2Q96Q27 587 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 HAPLN3Q96S86 360 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 CYP2S1Q96SQ9 504 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 DESI2Q9BSY9 194 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 TRMT61BQ9BVS5 477 aaKnown RBP11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 OSER1Q9NX31 292 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 SMPD4Q9NXE4 827 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 STIM2Q9P246 746 aa11.45□□□□□ -0.58
SMNDC1-203ENST00000460483 SYNJ2BP-COX16A0A087WUM0 186 aa11.44□□□□□ -0.58
SMNDC1-203ENST00000460483 KCNU1A8MYU2 1149 aa11.44□□□□□ -0.58
SMNDC1-203ENST00000460483 LEFTY2O00292 366 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms