RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 TDGF1P13385 188 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 DCAF6Q58WW2 860 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 SYPL2Q5VXT5 272 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 MSANTD2Q6P1R3 559 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 NUDT18Q6ZVK8 323 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 CEP68Q76N32 757 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 TMEM110Q86TL2 294 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 NOP9Q86U38 636 aaKnown RBP19.47■□□□□ 0.71
USP39-209ENST00000458268 TAC4Q86UU9 113 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 ETFBKMTQ8IXQ9 262 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 TERB1Q8NA31 727 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 TXNDC5Q8NBS9 432 aaKnown RBP19.47■□□□□ 0.71
USP39-209ENST00000458268 TMEM35BQ8NCS4 154 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 TSTD1Q8NFU3 115 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 CCDC26Q8TAB7 109 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 SLC20A1Q8WUM9 679 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 SERPINB11Q96P15 392 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 HSD3B7Q9H2F3 369 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 FAM204AQ9H8W3 233 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 SIK3Q9Y2K2 1263 aa19.47■□□□□ 0.71
USP39-209ENST00000458268 MYO18AQ92614 2054 aaKnown RBP19.47■□□□□ 0.71
USP39-209ENST00000458268 GOLGA6L7A0A1B0GV03 622 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 PROB1E7EW31 1015 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 CACNG3O60359 315 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 FYNP06241 537 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 RNASE9P60153 205 aaKnown RBP19.46■□□□□ 0.71
USP39-209ENST00000458268 YWHAZP63104 245 aaKnown RBP19.46■□□□□ 0.71
USP39-209ENST00000458268 PREPLQ4J6C6 727 aaPredicted RBP19.46■□□□□ 0.71
USP39-209ENST00000458268 PTPN20Q4JDL3 420 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 C2CD6Q53TS8 623 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 RFWD3Q6PCD5 774 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 CACNA2D4Q7Z3S7 1137 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 ZNF513Q8N8E2 541 aaPredicted RBP19.46■□□□□ 0.71
USP39-209ENST00000458268 ZBTB44Q8NCP5 570 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 RNF34Q969K3 372 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 BPIFA3Q9BQP9 254 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 TRIM62Q9BVG3 475 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 FAM126AQ9BYI3 521 aaPredicted RBP19.46■□□□□ 0.71
USP39-209ENST00000458268 LHX5Q9H2C1 402 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 POPDC2Q9HBU9 364 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 SEPT11Q9NVA2 429 aaKnown RBP19.46■□□□□ 0.71
USP39-209ENST00000458268 MARK1Q9P0L2 795 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 RAB23Q9ULC3 237 aa19.46■□□□□ 0.71
USP39-209ENST00000458268 ZFHX2Q9C0A1 2572 aaPredicted RBP19.45■□□□□ 0.7
USP39-209ENST00000458268 GOLGA8SH3BPF8 625 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 TEX33O43247 280 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 SOX5P35711 763 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 STAT1P42224 750 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 RPL34P49207 117 aaKnown RBP19.45■□□□□ 0.7
USP39-209ENST00000458268 SLC11A2P49281 568 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 DGKEP52429 567 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 SNX16P57768 344 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 TPM4P67936 248 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 PITX1P78337 314 aaPredicted RBP19.45■□□□□ 0.7
USP39-209ENST00000458268 FILIP1LQ4L180 1135 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 FYB2Q5VWT5 728 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 NAA35Q5VZE5 725 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 NUGGCQ68CJ6 796 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 ANO7Q6IWH7 933 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 MAMSTRQ6ZN01 415 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 SYT13Q7L8C5 426 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 LONP2Q86WA8 852 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 DEFB106AQ8N104 65 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 PHTF2Q8N3S3 785 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 P2RY11Q96G91 374 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 TPSD1Q9BZJ3 242 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 STIM2Q9P246 746 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 NCDNQ9UBB6 729 aa19.45■□□□□ 0.7
USP39-209ENST00000458268 SMG5Q9UPR3 1016 aaKnown RBP19.45■□□□□ 0.7
USP39-209ENST00000458268 SGK1O00141 431 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 TRUB2O95900 331 aaKnown RBP19.44■□□□□ 0.7
USP39-209ENST00000458268 SERPINC1P01008 464 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 APOEP02649 317 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 TNFRSF4P43489 277 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 MRPS21P82921 87 aaKnown RBP19.44■□□□□ 0.7
USP39-209ENST00000458268 SIM2Q14190 667 aaPredicted RBP19.44■□□□□ 0.7
USP39-209ENST00000458268 MPPE1Q53F39 396 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 EFHC1Q5JVL4 640 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 EGFLAMQ63HQ2 1017 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 PHLDB2Q86SQ0 1253 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 LUZP1Q86V48 1076 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 ERICH1Q86X53 443 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 UNC45BQ8IWX7 931 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 PGBD3Q8N328 593 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 IL17RCQ8NAC3 791 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 EPS8L1Q8TE68 723 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 CPA5Q8WXQ8 436 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 TMA16Q96EY4 203 aaKnown RBP19.44■□□□□ 0.7
USP39-209ENST00000458268 FUCA2Q9BTY2 467 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 CBX8Q9HC52 389 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 BCCIPQ9P287 314 aaKnown RBP eCLIP19.44■□□□□ 0.7
USP39-209ENST00000458268 MMP17Q9ULZ9 603 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 INVSQ9Y283 1065 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 EML5Q05BV3 1969 aa19.44■□□□□ 0.7
USP39-209ENST00000458268 ACSL4O60488 711 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 PAPSS2O95340 614 aaPredicted RBP19.43■□□□□ 0.7
USP39-209ENST00000458268 APBB3O95704 486 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 CDK17Q00537 523 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 NME3Q13232 169 aa19.43■□□□□ 0.7
USP39-209ENST00000458268 ZC3H12AQ5D1E8 599 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms