RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MSANTD4Q8NCY6 345 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 TTC16Q8NEE8 873 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 DQX1Q8TE96 717 aaKnown RBP10.49□□□□□ -0.73
ATG4A-206ENST00000457035 GOLGA1Q92805 767 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 NT5C3BQ969T7 300 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 VCPIP1Q96JH7 1222 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 C11orf70Q9BRQ4 267 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 TRIM62Q9BVG3 475 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 EBF3Q9H4W6 596 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 HEBP1Q9NRV9 189 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 SEPT11Q9NVA2 429 aaKnown RBP10.49□□□□□ -0.73
ATG4A-206ENST00000457035 ADAM22Q9P0K1 906 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 ARHGAP20Q9P2F6 1191 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 TBC1D14Q9P2M4 693 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 ADAMTS1Q9UHI8 967 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 RASAL2Q9UJF2 1139 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 STRIP2Q9ULQ0 834 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 SH3BP1Q9Y3L3 701 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 HBS1LQ9Y450 684 aaKnown RBP10.49□□□□□ -0.73
ATG4A-206ENST00000457035 WNT6Q9Y6F9 365 aa10.49□□□□□ -0.73
ATG4A-206ENST00000457035 COL4A3Q01955 1670 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 AKR1B15C9JRZ8 316 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 SLC9A3R1O14745 358 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 CAPN9O14815 690 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 MSI1O43347 362 aaKnown RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 MFAP3LO75121 409 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 TRUB2O95900 331 aaKnown RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 IGLV3-27P01718 113 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 FTLP02792 175 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 CALB1P05937 261 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 HMBSP08397 361 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 IRF1P10914 325 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 GLULP15104 373 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 NOS2P35228 1153 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 MATKP42679 507 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 PTPN5P54829 565 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 VCPP55072 806 aaKnown RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 STARD6P59095 220 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 RNASE9P60153 205 aaKnown RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 MLF2Q15773 248 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 ASTE1Q2TB18 679 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 ITPRIPL2Q3MIP1 535 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 TRNP1Q6NT89 227 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 RHBDF2Q6PJF5 856 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 PHLDB2Q86SQ0 1253 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 DNAAF5Q86Y56 855 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 BBS7Q8IWZ6 715 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 TC2NQ8N9U0 490 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 PLD4Q96BZ4 506 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 OTUB2Q96DC9 234 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 CHFRQ96EP1 664 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 SLC39A13Q96H72 371 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 CHP1Q99653 195 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 DDX23Q9BUQ8 820 aaKnown RBP10.48□□□□□ -0.73
ATG4A-206ENST00000457035 ISCUQ9H1K1 167 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 ABHD10Q9NUJ1 306 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 WDR35Q9P2L0 1181 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 FBXL21Q9UKT6 434 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 CA14Q9ULX7 337 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 VPS9D1Q9Y2B5 631 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 DOCK4Q8N1I0 1966 aa10.48□□□□□ -0.73
ATG4A-206ENST00000457035 NUP205Q92621 2012 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 A0A087X0T9 212 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 SIGLEC16A6NMB1 481 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 TMCO5BA8MYB1 307 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 GOLGA8SH3BPF8 625 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 RTN2O75298 545 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 DAB1O75553 588 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 ADCY5O95622 1261 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 PDGFBP01127 241 aaPredicted RBP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 TPM1P09493 284 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 FAM228BP0C875 321 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 CORO1AP31146 461 aaKnown RBP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 GJA4P35212 333 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 FLT3P36888 993 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 EIF4A3P38919 411 aaKnown RBP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 SOX9P48436 509 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 IFNAR2P48551 515 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 TBX4P57082 545 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 CDK17Q00537 523 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 PRKCQQ04759 706 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 RING1Q06587 406 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 NNTQ13423 1086 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 DHCR24Q15392 516 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 GAB4Q2WGN9 574 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 TDRD12Q587J7 1177 aaKnown RBP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 FAM102AQ5T9C2 384 aaPredicted RBP10.47□□□□□ -0.73
ATG4A-206ENST00000457035 PPP1R2P3Q6NXS1 205 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 BNIPLQ7Z465 357 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 TAC4Q86UU9 113 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 CNGA4Q8IV77 575 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 SIX5Q8N196 739 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 ADAM32Q8TC27 787 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 CSGALNACT1Q8TDX6 532 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 ATP2A3Q93084 1043 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 AZIN2Q96A70 460 aa10.47□□□□□ -0.73
ATG4A-206ENST00000457035 FCRL2Q96LA5 508 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms