RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MTA2O94776 668 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 APOEP02649 317 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 RDXP35241 583 aaKnown RBP14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 SLC11A2P49281 568 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 CXCR3P49682 368 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 SULT1E1P49888 294 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 MLLT6P55198 1093 aaPredicted RBP14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 RPL7AP62424 266 aaKnown RBP14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 CCDC173Q0VFZ6 552 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 CCDC14Q49A88 953 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 Q6ZNB5 142 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 RNF135Q8IUD6 432 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 UBALD2Q8IYN6 164 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 EMC1Q8N766 993 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 JOSD2Q8TAC2 188 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 DNASE1L2Q92874 299 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 FCRL2Q96LA5 508 aaPredicted RBP14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 UHRF1Q96T88 793 aaPredicted RBP14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 DDX50Q9BQ39 737 aaKnown RBP14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 RPP25Q9BUL9 199 aaKnown RBP14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 NUP85Q9BW27 656 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 PLA2G2FQ9BZM2 168 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 MYO1AQ9UBC5 1043 aa14.89□□□□□ -0.03
HMGXB4-204ENST00000455359 DOCK6Q96HP0 2047 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 A0A0A6YYK5 440 aaPredicted RBP14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 FAM170AA1A519 330 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 KCNU1A8MYU2 1149 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 MSI1O43347 362 aaKnown RBP14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 SRFP11831 508 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 CHKAP35790 457 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 IFNAR2P48551 515 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 DEUP1Q05D60 604 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 PIGHQ14442 188 aaPredicted RBP14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 OTUD1Q5VV17 481 aaPredicted RBP14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 TRNP1Q6NT89 227 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 DNAAF5Q86Y56 855 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 ADAM32Q8TC27 787 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 RSAD2Q8WXG1 361 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 RFFLQ8WZ73 363 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 ATP2A3Q93084 1043 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 CFAP57Q96MR6 1250 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 TBCBQ99426 244 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 BRD9Q9H8M2 597 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 DUS2Q9NX74 493 aaKnown RBP14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 CTTNBP2NLQ9P2B4 639 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 IP6K2Q9UHH9 426 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 DUSP12Q9UNI6 340 aa14.88□□□□□ -0.03
HMGXB4-204ENST00000455359 BDP1A6H8Y1 2624 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 MYH10P35580 1976 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 DOCK8Q8NF50 2099 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 BTNL10A8MVZ5 291 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 MYO1FO00160 1098 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 ARNTLO00327 626 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 NFATC1O95644 943 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 PTMAP06454 111 aaKnown RBP14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 ASGR2P07307 311 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 GLULP15104 373 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 PSMA2P25787 234 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 CORO1AP31146 461 aaKnown RBP14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 GDI1P31150 447 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 ARHGAP25P42331 645 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 AIF1P55008 147 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 HADHBP55084 474 aaKnown RBP14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 PITX1P78337 314 aaPredicted RBP14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 NME3Q13232 169 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 ADGRF1Q5T601 910 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 C1orf228Q6PIY5 440 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 FAM217AQ8IXS0 508 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 CPXM2Q8N436 756 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 NIPA2Q8N8Q9 360 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 ATP6V0D2Q8N8Y2 350 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 RIN3Q8TB24 985 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 ZNF564Q8TBZ8 553 aaPredicted RBP14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 ARHGEF26Q96DR7 871 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 BTN2A3PQ96KV6 586 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 PPP1R9BQ96SB3 815 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 PACSIN1Q9BY11 444 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 WDCPQ9H6R7 721 aa14.87□□□□□ -0.03
HMGXB4-204ENST00000455359 RNF8O76064 485 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 GJB6O95452 261 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 KLKB1P03952 638 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 IRF1P10914 325 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 PCK1P35558 622 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 VAV2P52735 878 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 ATP11AP98196 1134 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 AMPD2Q01433 879 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 NR1H3Q13133 447 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 GRM2Q14416 872 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 EML3Q32P44 896 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 ARL13BQ3SXY8 428 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 ZC3H12AQ5D1E8 599 aaKnown RBP14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 ADGRG2Q8IZP9 1017 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 CPA6Q8N4T0 437 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 FAM172AQ8WUF8 416 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 RNF34Q969K3 372 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 MSANTD3Q96H12 275 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 PIGVQ9NUD9 493 aa14.86□□□□□ -0.03
HMGXB4-204ENST00000455359 ARHGEF38Q9NXL2 777 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms