RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 FARP2O94887 1054 aaPredicted RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 INHBAP08476 426 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 CHRNB1P11230 501 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 P4HA1P13674 534 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 BTDP43251 543 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 CYP2J2P51589 502 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 DLG4P78352 724 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 NFIL3Q16649 462 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 NRF1Q16656 503 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 MSS51Q4VC12 460 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 AARS2Q5JTZ9 985 aaKnown RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 ANKRD26P1Q6NSI1 321 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 GET4Q7L5D6 327 aaPredicted RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 SLC47A2Q86VL8 602 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 RHPN2Q8IUC4 686 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 MMAAQ8IVH4 418 aaKnown RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 PALM2Q8IXS6 379 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 TTC39CQ8N584 583 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 ATP6V0D2Q8N8Y2 350 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 OR7G1Q8NGA0 311 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 LILRB4Q8NHJ6 448 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 DOK1Q99704 481 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 TMEM79Q9BSE2 394 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 OSBPL11Q9BXB4 747 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 CXorf21Q9HAI6 301 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 MKNK2Q9HBH9 465 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 XAB2Q9HCS7 855 aaKnown RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 MCM9Q9NXL9 1143 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 BCS1LQ9Y276 419 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 PLLPQ9Y342 182 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 SLC30A1Q9Y6M5 507 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 PHLPP1O60346 1717 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 A0A087WXM4 84 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 C7orf72A4D263 438 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 H0YJX3 145 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 hCG_1984214I3L0E3 225 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 MEIS1O00470 390 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 PSTPIP1O43586 416 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 ZMPSTE24O75844 475 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 RSL1D1O76021 490 aaKnown RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 ENO2P09104 434 aaPredicted RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 MYCLP1P12525 358 aaPredicted RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 ZNF26P17031 533 aaPredicted RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 CD58P19256 250 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 EPHA3P29320 983 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 STAT3P40763 770 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 NT5C2P49902 561 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 PSMC6P62333 389 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 GNA12Q03113 381 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 GAD2Q05329 585 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 BFSP1Q12934 665 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 ALCAMQ13740 583 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 PPP2R5DQ14738 602 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 COG2Q14746 738 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 ZNF394Q53GI3 561 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 FNBP1LQ5T0N5 605 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 ZNF280DQ6N043 979 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 TTC30AQ86WT1 665 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 RAVER1Q8IY67 606 aaKnown RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 SIX5Q8N196 739 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 CPSF7Q8N684 471 aaKnown RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 TERB1Q8NA31 727 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 PDZD8Q8NEN9 1154 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 CALML6Q8TD86 181 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 TANKQ92844 425 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 ZNF597Q96LX8 424 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 ZNF641Q96N77 438 aaPredicted RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 SERPINI1Q99574 410 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 WDR83Q9BRX9 315 aaKnown RBP8.88□□□□□ -0.99
LSM5-208ENST00000450169 MROQ9BYG7 248 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 BCAS3Q9H6U6 928 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 BCAP29Q9UHQ4 241 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 PACSIN3Q9UKS6 424 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 CPQQ9Y646 472 aa8.88□□□□□ -0.99
LSM5-208ENST00000450169 NRAPQ86VF7 1730 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PRSS51A0A1B0GVH4 220 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 CYB561D2O14569 222 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 EIF3DO15371 548 aaKnown RBP eCLIP8.87□□□□□ -0.99
LSM5-208ENST00000450169 KLHL41O60662 606 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 GUCY1B2O75343 617 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 MCF2P10911 925 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 VDRP11473 427 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PTPN1P18031 435 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 DCKP27707 260 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 SCNN1DP51172 638 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ADAM17P78536 824 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 CETN1Q12798 172 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 LRP8Q14114 963 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 LSM12Q3MHD2 195 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 KAZNQ674X7 775 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 SCARA3Q6AZY7 606 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 DRICH1Q6PGQ1 229 aaPredicted RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 BLOC1S3Q6QNY0 202 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 USP43Q70EL4 1123 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ZBTB46Q86UZ6 589 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 IGFN1Q86VF2 1251 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 CATSPER3Q86XQ3 398 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ZFPM1Q8IX07 1006 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms