RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 CREB3O43889 395 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 TJP3O95049 919 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 HMBSP08397 361 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 ZDHHC11BP0C7U3 371 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 CSH1P0DML2 217 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 CSH2P0DML3 217 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 PTPN7P35236 360 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 RBM23Q86U06 439 aaKnown RBP25.82■■□□□ 1.72
RFFL-206ENST00000447669 NETO2Q8NC67 525 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 SLC22A17Q8WUG5 538 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 DCLK3Q9C098 648 aa25.82■■□□□ 1.72
RFFL-206ENST00000447669 F9P00740 461 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 PECAM1P16284 738 aaPredicted RBP25.81■■□□□ 1.72
RFFL-206ENST00000447669 ERVK-21P61565 698 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 PDK2Q15119 407 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 CCDC137Q6PK04 289 aaKnown RBP25.81■■□□□ 1.72
RFFL-206ENST00000447669 ARHGAP18Q8N392 663 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 CCDC33Q8N5R6 958 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 PQLC3Q8N755 202 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 LRRN4Q8WUT4 740 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 ARNTL2Q8WYA1 636 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 RNF157Q96PX1 679 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 TRIM62Q9BVG3 475 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 ANAPC1Q9H1A4 1944 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 ESYT3A0FGR9 886 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 EPOPA6NHQ4 379 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 NRG2O14511 850 aaPredicted RBP25.81■■□□□ 1.72
RFFL-206ENST00000447669 TLR5O60602 858 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 MOCS2O96007 188 aaPredicted RBP25.81■■□□□ 1.72
RFFL-206ENST00000447669 C8AP07357 584 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 CLCN4P51793 760 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 EPHB3P54753 998 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 SND1Q7KZF4 910 aaKnown RBP eCLIP25.81■■□□□ 1.72
RFFL-206ENST00000447669 GPR161Q8N6U8 529 aaKnown RBP25.81■■□□□ 1.72
RFFL-206ENST00000447669 TRIM51Q9BSJ1 452 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 MAK16Q9BXY0 300 aaKnown RBP25.81■■□□□ 1.72
RFFL-206ENST00000447669 ETNK2Q9NVF9 386 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 CLIC5Q9NZA1 410 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 RASAL2Q9UJF2 1139 aa25.81■■□□□ 1.72
RFFL-206ENST00000447669 MTCL1Q9Y4B5 1905 aaKnown RBP25.81■■□□□ 1.72
RFFL-206ENST00000447669 ZNF840PA6NDX5 716 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 GLUD1P00367 558 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 RB1P06400 928 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 AMPD1P23109 780 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 GBP1P32455 592 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 COILP38432 576 aaPredicted RBP25.8■■□□□ 1.72
RFFL-206ENST00000447669 RBM10P98175 930 aaKnown RBP25.8■■□□□ 1.72
RFFL-206ENST00000447669 VEPH1Q14D04 833 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 CLUL1Q15846 466 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 CYP1B1Q16678 543 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 TMEM150AQ86TG1 271 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 MAP7D3Q8IWC1 876 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 HS6ST3Q8IZP7 471 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 FAM71BQ8TC56 605 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 SIK2Q9H0K1 926 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 COMMD8Q9NX08 183 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 C5orf42Q9H799 3197 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 ATG2AQ2TAZ0 1938 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.8■■□□□ 1.72
RFFL-206ENST00000447669 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.8■■□□□ 1.72
RFFL-206ENST00000447669 C2orf78A6NCI8 922 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 H3BNC9 293 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 RFXAPO00287 272 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 RFPL2O75678 378 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 EPCAMP16422 314 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 EFHC2Q5JST6 749 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 C1orf228Q6PIY5 440 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 ADGRD2Q7Z7M1 963 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 PRUNE1Q86TP1 453 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 GDPD5Q8WTR4 605 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 PSMG2Q969U7 264 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 CSPG4P5Q96PW8 444 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 DNPEPQ9ULA0 475 aa25.8■■□□□ 1.72
RFFL-206ENST00000447669 CCL16O15467 120 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 VSNL1P62760 191 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 UBE3AQ05086 875 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 MSANTD2Q6P1R3 559 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 BBS12Q6ZW61 710 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 CCDC105Q8IYK2 499 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 MYRFLQ96LU7 910 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 LRRC19Q9H756 370 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 MARCH2Q9P0N8 246 aa25.79■■□□□ 1.72
RFFL-206ENST00000447669 HEXIM1O94992 359 aaKnown RBP25.78■■□□□ 1.72
RFFL-206ENST00000447669 OTUD4Q01804 1114 aaKnown RBP25.78■■□□□ 1.72
RFFL-206ENST00000447669 PPP2R2DQ66LE6 453 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 PLD5Q8N7P1 536 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 ACTL9Q8TC94 416 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 NTAN1Q96AB6 310 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 SLC12A8A0AV02 714 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 PTGIRP43119 386 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 PSEN1P49768 467 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 DR1Q01658 176 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 GUCY2DQ02846 1103 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 GSPT2Q8IYD1 628 aaKnown RBP25.78■■□□□ 1.72
RFFL-206ENST00000447669 C12orf50Q8NA57 414 aaPredicted RBP25.78■■□□□ 1.72
RFFL-206ENST00000447669 FCRL2Q96LA5 508 aaPredicted RBP25.78■■□□□ 1.72
RFFL-206ENST00000447669 SERPINB11Q96P15 392 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 ZNF670Q9BS34 389 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 TRIM31Q9BZY9 425 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 RNF38Q9H0F5 515 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms