RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 NCOA4Q13772 614 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 TMEM215Q68D42 235 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 SCARA5Q6ZMJ2 495 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 SCD5Q86SK9 330 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 PDILTQ8N807 584 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 UCMAQ8WVF2 138 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 IGSF8Q969P0 613 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 HNRNPABQ99729 332 aaKnown RBP15.14■□□□□ 0.01
HMGN1-208ENST00000443046 C6orf106Q9H6K1 298 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-208ENST00000443046 PNPLA8Q9NP80 782 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
HMGN1-208ENST00000443046 CLEC4EQ9ULY5 219 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 ANKRD6Q9Y2G4 727 aa15.14■□□□□ 0.01
HMGN1-208ENST00000443046 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-208ENST00000443046 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-208ENST00000443046 GOLGA8CPA6NN73 597 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 LRRIQ3A6PVS8 624 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-208ENST00000443046 PHACTR2O75167 634 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 FAM200BP0CF97 657 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 ACADMP11310 421 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 ACSL1P33121 698 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 GRK6P43250 576 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 GRIA4P48058 902 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 KIF11P52732 1056 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 CEBPZQ03701 1054 aaKnown RBP15.13■□□□□ 0.01
HMGN1-208ENST00000443046 C19orf57Q0VDD7 668 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 ORC1Q13415 861 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 CAMK2GQ13555 558 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-208ENST00000443046 EIF4HQ15056 248 aaKnown RBP15.13■□□□□ 0.01
HMGN1-208ENST00000443046 E2F5Q15329 346 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 FAM26FQ5R3K3 315 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 C10orf120Q5SQS8 335 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 ANKS1BQ7Z6G8 1248 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 TMPRSS12Q86WS5 348 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 USP28Q96RU2 1077 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 PRORYQ9H606 182 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 FAM49BQ9NUQ9 324 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 USP3Q9Y6I4 520 aa15.13■□□□□ 0.01
HMGN1-208ENST00000443046 COL5A1P20908 1838 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-208ENST00000443046 MUC22E2RYF6 1773 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-208ENST00000443046 ATXN7O15265 892 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-208ENST00000443046 TIMM44O43615 452 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 TSPAN3O60637 253 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 PRB1P04280 392 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 ASPAP45381 313 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 ABCG1P45844 678 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 PSEN1P49768 467 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 BIRC3Q13489 604 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 SGSM1Q2NKQ1 1148 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 KCNT1Q5JUK3 1230 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 CCDC186Q7Z3E2 898 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 TADA2BQ86TJ2 420 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 NELFCDQ8IXH7 590 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 FAM217AQ8IXS0 508 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 LSM14AQ8ND56 463 aaKnown RBP15.12■□□□□ 0.01
HMGN1-208ENST00000443046 OR2T3Q8NH03 318 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 TMEM174Q8WUU8 243 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 SORCS1Q8WY21 1168 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 SLC39A7Q92504 469 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 C7orf25Q9BPX7 421 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 ORAI3Q9BRQ5 295 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 SLC2A11Q9BYW1 496 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 CUEDC2Q9H467 287 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 TM9SF3Q9HD45 589 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 CLIC5Q9NZA1 410 aa15.12■□□□□ 0.01
HMGN1-208ENST00000443046 AGO1Q9UL18 857 aaKnown RBP15.12■□□□□ 0.01
HMGN1-208ENST00000443046 H0Y8X5 98 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 KCNK3O14649 394 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 RPN1P04843 607 aaKnown RBP15.11■□□□□ 0.01
HMGN1-208ENST00000443046 EPHX1P07099 455 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 HLA-EP13747 358 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 ADORA2BP29275 332 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 EIF2S3P41091 472 aaKnown RBP15.11■□□□□ 0.01
HMGN1-208ENST00000443046 CTSKP43235 329 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 CCT8P50990 548 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 ASIC1P78348 528 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 COG7P83436 770 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 AMPD3Q01432 767 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 INCA1Q0VD86 236 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 CUL4AQ13619 759 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 TEAD4Q15561 434 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 ZACNQ401N2 412 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 ERICH6BQ5W0A0 696 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 DHRS13Q6UX07 377 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 FAM124AQ86V42 546 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 CPXM2Q8N436 756 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 TAF4BQ92750 862 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 BIRC7Q96CA5 298 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 TWNKQ96RR1 684 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 DCLK3Q9C098 648 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 TMEM245Q9H330 911 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 DMAC2Q9NW81 257 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 TFIP11Q9UBB9 837 aaKnown RBP15.11■□□□□ 0.01
HMGN1-208ENST00000443046 NAGPAQ9UK23 515 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 PCDHGA1Q9Y5H4 931 aa15.11■□□□□ 0.01
HMGN1-208ENST00000443046 EXOC3O60645 756 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 ASS1P00966 412 aaKnown RBP15.1■□□□□ 0.01
HMGN1-208ENST00000443046 NEFLP07196 543 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 P4HA1P13674 534 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms