RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 TERB1Q8NA31 727 aa16.95■□□□□ 0.3
SMPD4-207ENST00000435455 DQX1Q8TE96 717 aaKnown RBP16.95■□□□□ 0.3
SMPD4-207ENST00000435455 IPO4Q8TEX9 1081 aaKnown RBP16.95■□□□□ 0.3
SMPD4-207ENST00000435455 USP33Q8TEY7 942 aa16.95■□□□□ 0.3
SMPD4-207ENST00000435455 SYNCQ9H7C4 482 aa16.95■□□□□ 0.3
SMPD4-207ENST00000435455 ASNSD1Q9NWL6 643 aa16.95■□□□□ 0.3
SMPD4-207ENST00000435455 MYO15AQ9UKN7 3530 aa16.95■□□□□ 0.3
SMPD4-207ENST00000435455 TBC1D3BA6NDS4 549 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 PRR23AA6NEV1 266 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 EPHB6O15197 1021 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 GFPT2O94808 682 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 PENKP01210 267 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-207ENST00000435455 IGLV3-27P01718 113 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 CDH5P33151 784 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-207ENST00000435455 SOX5P35711 763 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 STAT1P42224 750 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 SEC13P55735 322 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 TBX4P57082 545 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 ZNF445P59923 1031 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 MESP2Q0VG99 397 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 IQCB1Q15051 598 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 ADGRF1Q5T601 910 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 TOGARAM2Q6ZUX3 1019 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 SYT13Q7L8C5 426 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 NOP9Q86U38 636 aaKnown RBP16.94■□□□□ 0.3
SMPD4-207ENST00000435455 MSANTD4Q8NCY6 345 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 EPS8L1Q8TE68 723 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 DDX1Q92499 740 aaKnown RBP16.94■□□□□ 0.3
SMPD4-207ENST00000435455 C2orf42Q9NWW7 574 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 TJP2Q9UDY2 1190 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 STOML2Q9UJZ1 356 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 NAALADL1Q9UQQ1 740 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 TLR6Q9Y2C9 796 aa16.94■□□□□ 0.3
SMPD4-207ENST00000435455 GFRA3O60609 400 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 LILRB5O75023 590 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 HSF2BPO75031 334 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 LMNAP02545 664 aaKnown RBP16.93■□□□□ 0.3
SMPD4-207ENST00000435455 SLC11A2P49281 568 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 DGKGP49619 791 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 TPM4P67936 248 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 DMC1Q14565 340 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 PTPN20Q4JDL3 420 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 C2orf27AQ580R0 203 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 TAF3Q5VWG9 929 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 OR6B2Q6IFH4 312 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 ZDHHC17Q8IUH5 632 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 CAMKK1Q8N5S9 505 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 KCNV2Q8TDN2 545 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 BHMTQ93088 406 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 AZIN2Q96A70 460 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 IRX2Q9BZI1 471 aaPredicted RBP16.93■□□□□ 0.3
SMPD4-207ENST00000435455 RTN4Q9NQC3 1192 aaKnown RBP16.93■□□□□ 0.3
SMPD4-207ENST00000435455 PLK2Q9NYY3 685 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 FBXO10Q9UK96 956 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 MMP17Q9ULZ9 603 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 USP34Q70CQ2 3546 aa16.93■□□□□ 0.3
SMPD4-207ENST00000435455 DMDP11532 3685 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 PTPRZ1P23471 2315 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 CCDC163A0A0D9SF12 145 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 ERBB2P04626 1255 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 KIR2DL1P43626 348 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 GABRB2P47870 512 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 FNTBP49356 437 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 CDK17Q00537 523 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 SLC6A3Q01959 620 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 MPPE1Q53F39 396 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 FYB2Q5VWT5 728 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 SYPL2Q5VXT5 272 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 OLFML1Q6UWY5 402 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 FAM183BPQ6ZVS7 135 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 SLC26A9Q7LBE3 791 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 TRMT11Q7Z4G4 463 aaKnown RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 TAC4Q86UU9 113 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 WDR5BQ86VZ2 330 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 LONP2Q86WA8 852 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 SFTPA1Q8IWL2 248 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 ZNF397Q8NF99 534 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 DDI1Q8WTU0 396 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 PIWIL1Q96J94 861 aaKnown RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 FCRL2Q96LA5 508 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 SLC2A13Q96QE2 648 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 DDX50Q9BQ39 737 aaKnown RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 SLC2A11Q9BYW1 496 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 CBX8Q9HC52 389 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 NOCTQ9UK39 431 aaKnown RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 SLC27A6Q9Y2P4 619 aa16.92■□□□□ 0.3
SMPD4-207ENST00000435455 EP300Q09472 2414 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-207ENST00000435455 ZNF292O60281 2723 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 FRYLO94915 3013 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 TRIM24O15164 1050 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 IRAK2O43187 625 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 TEX33O43247 280 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 ACSL4O60488 711 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 KLF8O95600 359 aaPredicted RBP16.91■□□□□ 0.3
SMPD4-207ENST00000435455 TRUB2O95900 331 aaKnown RBP16.91■□□□□ 0.3
SMPD4-207ENST00000435455 MMEP08473 750 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 CNR2P34972 360 aa16.91■□□□□ 0.3
SMPD4-207ENST00000435455 TIE1P35590 1138 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms