RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SESN2P58004 480 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 MRPS5P82675 430 aaKnown RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 NYAP1Q6ZVC0 841 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 IRX2Q9BZI1 471 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 L1RE1Q9UN81 338 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 AP5Z1O43299 807 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 RPL17P18621 184 aaKnown RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 CHKAP35790 457 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 RENBPP51606 427 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 RARS2Q5T160 578 aaKnown RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 C11orf63Q6NUN7 778 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 TMEM192Q8IY95 271 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 KREMEN2Q8NCW0 462 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 WDR24Q96S15 920 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 ATP13A1Q9HD20 1204 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 ABCB6Q9NP58 842 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 CNGB3Q9NQW8 809 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 COPS2P61201 443 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 TFAP2DQ7Z6R9 452 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 ZBED8Q8IZ13 594 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 GPR63Q9BZJ6 419 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 Q9H521 79 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 TELO2Q9Y4R8 837 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 POLR2EP19388 210 aaKnown RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 TTC23LQ6PF05 361 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 FAM71DQ8N9W8 422 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 NR1H4Q96RI1 486 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-207ENST00000429896 APRTP07741 180 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 PBX3P40426 434 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ZNF135P52742 658 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 SNCBQ16143 134 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 KLHL38Q2WGJ6 581 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 DENND1CQ8IV53 801 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 COL11A2P13942 1736 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 UBA6A0AVT1 1052 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 DAB1O75553 588 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 PRKCIP41743 596 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 TBCCQ15814 346 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 FNDC3BQ53EP0 1204 aaKnown RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 DMAC2Q9NW81 257 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ZNF185O15231 689 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ENDOD1O94919 500 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 TPGS2Q68CL5 300 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 OTULINQ96BN8 352 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ATXN7L3BQ96GX2 97 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ELAC1Q9H777 363 aaKnown RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ERVK-5Q9HDB9 667 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 NCAM2O15394 837 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 TLR5O60602 858 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 KRT37O76014 449 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 CHRNA1P02708 482 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ZCWPW2Q504Y3 356 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ZC3H12AQ5D1E8 599 aaKnown RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 WDR59Q6PJI9 974 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 YIPF2Q9BWQ6 316 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 SLC7A5P2Q9GIP4 190 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 TLR9Q9NR96 1032 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 SLC30A1Q9Y6M5 507 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 HSPA8P11142 646 aaKnown RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 CASP8Q14790 479 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 TERF2Q15554 542 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 DNAAF5Q86Y56 855 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-207ENST00000429896 LZTR1Q8N653 840 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 AGR3Q8TD06 166 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 COG4Q9H9E3 785 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 AMACRQ9UHK6 382 aa13.32□□□□□ -0.28
PTCH1-207ENST00000429896 ATP5BP06576 529 aaKnown RBP13.31□□□□□ -0.28
PTCH1-207ENST00000429896 KCNE1P15382 129 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 SMAD3P84022 425 aaKnown RBP13.31□□□□□ -0.28
PTCH1-207ENST00000429896 RFX8Q6ZV50 586 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 LINC00523Q86TU6 105 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 CRYGNQ8WXF5 182 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 DOLKQ9UPQ8 538 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 TBC1D3BA6NDS4 549 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 LUC7L3O95232 432 aaKnown RBP13.31□□□□□ -0.28
PTCH1-207ENST00000429896 TGM2P21980 687 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 AKT1P31749 480 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 FDFT1P37268 417 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 LCLAT1Q6UWP7 414 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 PBXIP1Q96AQ6 731 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 CARD9Q9H257 536 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 NDFIP2Q9NV92 336 aa13.31□□□□□ -0.28
PTCH1-207ENST00000429896 WBP1LQ9NX94 342 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms