RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 LNPEPQ9UIQ6 1025 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 AHDC1Q5TGY3 1603 aaPredicted RBP17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 TRIM60Q495X7 471 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 LMNTD2Q8IXW0 634 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 MCRS1Q96EZ8 462 aa17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 NIFKQ9BYG3 293 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 UPF3AQ9H1J1 476 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-203ENST00000429416 NCF1BA6NI72 391 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 NCF1CA8MVU1 366 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 WNT7AO00755 349 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 NCF1P14598 390 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 RPL17P18621 184 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 CLCNKBP51801 687 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 C15orf59Q2T9L4 293 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 PTAR1Q7Z6K3 402 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 ANKRD52Q8NB46 1076 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 PPP1R16AQ96I34 528 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 MRPL45Q9BRJ2 306 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 C1QTNF7Q9BXJ2 289 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 PKN2Q16513 984 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 OLFML2BQ68BL8 750 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 LZTR1Q8N653 840 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 SERPINI1Q99574 410 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 FAM96AQ9H5X1 160 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 ANKRD26Q9UPS8 1709 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 PRKCQQ04759 706 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 RARS2Q5T160 578 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 FAM35AQ86V20 835 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 EXD1Q8NHP7 514 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 LENG9Q96B70 501 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 SEZ6LQ9BYH1 1024 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 ARL5CA6NH57 179 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 SMAPO00193 183 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 ITGB6P18564 788 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 MIPP30301 263 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 PTPN7P35236 360 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 GPM6BQ13491 265 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 TOP6BLQ8N6T0 577 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 COG1Q8WTW3 980 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 HSFY1Q96LI6 401 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 PLK2Q9NYY3 685 aa17.59■□□□□ 0.41
SMARCA4-203ENST00000429416 H2AFYO75367 372 aaKnown RBP17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 POLR2LP62875 67 aaKnown RBP17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 POU4F1Q01851 419 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 C6orf10Q5SRN2 563 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 FBXO38Q6PIJ6 1188 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 FAM124AQ86V42 546 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 KLHL29Q96CT2 875 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 AHCYL2Q96HN2 611 aaKnown RBP17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 FRMD3A2A2Y4 597 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 TPH1P17752 444 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 PBX3P40426 434 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 RAP1GDS1P52306 607 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 EFTUD2Q15029 972 aaKnown RBP eCLIP17.58■□□□□ 0.414e-7■■■■□ 22
SMARCA4-203ENST00000429416 TBC1D13Q9NVG8 400 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 CLDND1Q9NY35 253 aa17.58■□□□□ 0.41
SMARCA4-203ENST00000429416 AKAP12Q02952 1782 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 SDR42E2A6NKP2 422 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 SERPINA4P29622 427 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 GRB14Q14449 540 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 ERP44Q9BS26 406 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 MAF1Q9H063 256 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 ZCWPW1Q9H0M4 648 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 PDZD7Q9H5P4 517 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 SPAG6O75602 509 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 MYL2P10916 166 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 PLA2G4AP47712 749 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 MCL1Q07820 350 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 IARS2Q9NSE4 1012 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 CFAP97Q9P2B7 532 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 PSMC3IPQ9P2W1 217 aaPredicted RBP17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 IGF2BP3O00425 579 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 MEFVO15553 781 aaPredicted RBP17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 GLP2RO95838 553 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 ERVK-10P10266 1014 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 SARSP49591 514 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 JAG1P78504 1218 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 CCDC3Q9BQI4 270 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 IKZF4Q9H2S9 585 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 SEPT3Q9UH03 358 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 GTF2IRD1Q9UHL9 959 aa17.58■□□□□ 0.4
SMARCA4-203ENST00000429416 NEDD8-MDP1E9PL57 170 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 TAF10Q12962 218 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 ARMC12Q5T9G4 340 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 TDRD5Q8NAT2 981 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 MYOCQ99972 504 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 SETMARQ53H47 684 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 TGS1Q96RS0 853 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 ZNF862O60290 1169 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 E2F6O75461 281 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 ADH1CP00326 375 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 SNRPAP09012 282 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 CYP2A6P11509 494 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 FAM183BPQ6ZVS7 135 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 MYO1HQ8N1T3 1032 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 PIH1D1Q9NWS0 290 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 SPASTQ9UBP0 616 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 A0A0B4J269 797 aa17.57■□□□□ 0.4
SMARCA4-203ENST00000429416 TMEM63BQ5T3F8 832 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms