RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 CDH5P33151 784 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 KRT9P35527 623 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 TIE1P35590 1138 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 SOX5P35711 763 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 GRIA2P42262 883 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 EIF4EBP2Q13542 120 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 ZSCAN23Q3MJ62 389 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 FBXO43Q4G163 708 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 HEATR6Q6AI08 1181 aaKnown RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 NADSYN1Q6IA69 706 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 OLFML1Q6UWY5 402 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 CCDC33Q8N5R6 958 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 ALLCQ8N6M5 410 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 SUMF1Q8NBK3 374 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 SLC39A13Q96H72 371 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 FCRL2Q96LA5 508 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 HHIPQ96QV1 700 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 DCLK3Q9C098 648 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 NAT10Q9H0A0 1025 aaKnown RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 DNAJC17Q9NVM6 304 aaKnown RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 CALCOCO1Q9P1Z2 691 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 XPO7Q9UIA9 1087 aaKnown RBP11.2□□□□□ -0.62
ATG4B-210ENST00000428861 STOML2Q9UJZ1 356 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 FBXO10Q9UK96 956 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 ZNF510Q9Y2H8 683 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 PCDHGA2Q9Y5H1 932 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 KIAA1549LQ6ZVL6 1849 aa11.2□□□□□ -0.62
ATG4B-210ENST00000428861 TBC1D3BA6NDS4 549 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-210ENST00000428861 SGK1O00141 431 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 HRO43593 1189 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 GFRA3O60609 400 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 ADAM23O75077 832 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 APODP05090 189 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 TPM2P07951 284 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 TBX4P57082 545 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 BPIFB4P59827 614 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 YWHAZP63104 245 aaKnown RBP11.19□□□□□ -0.62
ATG4B-210ENST00000428861 FMO1Q01740 532 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 DMC1Q14565 340 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 FAM133BQ5BKY9 247 aaKnown RBP11.19□□□□□ -0.62
ATG4B-210ENST00000428861 OTUD1Q5VV17 481 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-210ENST00000428861 OR6B2Q6IFH4 312 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 BEND5Q7L4P6 421 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 SYT13Q7L8C5 426 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 LUZP1Q86V48 1076 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 DEFB106AQ8N104 65 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 CPXM2Q8N436 756 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 TERB1Q8NA31 727 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 TXNDC5Q8NBS9 432 aaKnown RBP11.19□□□□□ -0.62
ATG4B-210ENST00000428861 ANKRD20A12PQ8NF67 263 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 OLIG1Q8TAK6 271 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-210ENST00000428861 EXOC4Q96A65 974 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 PCMTD1Q96MG8 357 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-210ENST00000428861 SLC2A13Q96QE2 648 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 PCDHB18PQ96TA0 734 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 ACOX2Q99424 681 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 POPDC2Q9HBU9 364 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 WDR35Q9P2L0 1181 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 DEC1Q9P2X7 70 aa11.19□□□□□ -0.62
ATG4B-210ENST00000428861 RIF1Q5UIP0 2472 aaKnown RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 SMTNL1A8MU46 457 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 IRAK2O43187 625 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 SART1O43290 800 aaKnown RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 ATG13O75143 517 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 KLF8O95600 359 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 TRUB2O95900 331 aaKnown RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 CYP1A1P04798 512 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 TFE3P19532 575 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 HOXD9P28356 352 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 HOXA6P31267 233 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 CHKAP35790 457 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 TNFRSF4P43489 277 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 HARS2P49590 506 aaKnown RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 NOMO3P69849 1222 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 SLC6A3Q01959 620 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 GEN1Q17RS7 908 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 DCAF6Q58WW2 860 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 ZC3H12AQ5D1E8 599 aaKnown RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 NAA35Q5VZE5 725 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 EGFLAMQ63HQ2 1017 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 GRAMD4Q6IC98 578 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 TRNP1Q6NT89 227 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 RFWD3Q6PCD5 774 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 LONP2Q86WA8 852 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 TMEM35BQ8NCS4 154 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 NEK11Q8NG66 645 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 WFDC5Q8TCV5 224 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 ATRIPQ8WXE1 791 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 CPA5Q8WXQ8 436 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 BAP1Q92560 729 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 GOLGA1Q92805 767 aa11.18□□□□□ -0.62
ATG4B-210ENST00000428861 XPO6Q96QU8 1125 aaKnown RBP11.18□□□□□ -0.62
ATG4B-210ENST00000428861 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms