RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 DDX23Q9BUQ8 820 aaKnown RBP9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 TKTL2Q9H0I9 626 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 ATXN3LQ9H3M9 355 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLITRK6Q9H5Y7 841 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 IP6K2Q9UHH9 426 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 TTC28Q96AY4 2481 aa9.91□□□□□ -0.82
HMGCLL1-206ENST00000428842 SHROOM3Q8TF72 1996 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 CCDC151A5D8V7 595 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 ANTXRLA6NF34 631 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 LRG1P02750 347 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAM163BP0C2L3 166 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 MAGEA11P43364 429 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 ACADSBP45954 432 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 SGSHP51688 502 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC25A52Q3SY17 297 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 EFHC1Q5JVL4 640 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 PPM1LQ5SGD2 360 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 C11orf63Q6NUN7 778 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 C14orf80Q86SX3 495 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 KLHL7Q8IXQ5 586 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC2A13Q96QE2 648 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 PLVAPQ9BX97 442 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 EMILIN2Q9BXX0 1053 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 NACA2Q9H009 215 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 RBM12Q9NTZ6 932 aaKnown RBP9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 MTMR10Q9NXD2 777 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 PLK2Q9NYY3 685 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 MPP6Q9NZW5 540 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 FNIP2Q9P278 1114 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 SCML2Q9UQR0 700 aa9.9□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC12A8A0AV02 714 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 C3orf70A6NLC5 250 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 RNF8O76064 485 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 KLKB1P03952 638 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 IL4RP24394 825 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 CTNNA1P35221 906 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 TUFMP49411 452 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 RGS19P49795 217 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 CDH6P55285 790 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLC7A5Q01650 507 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 MTM1Q13496 603 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 TEAD2Q15562 447 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 PAPD7Q5XG87 772 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 LEKR1Q6ZMV7 388 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 TMC8Q8IU68 726 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 HNRNPLLQ8WVV9 542 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 MYLIPQ8WY64 445 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 PSMG2Q969U7 264 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZNF707Q96C28 371 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 ERLEC1Q96DZ1 483 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 KCTD15Q96SI1 283 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 LRRC3Q9BY71 257 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 FUT8Q9BYC5 575 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 ANKZF1Q9H8Y5 726 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 ARFGAP3Q9NP61 516 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 RAB21Q9UL25 225 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 IRAK3Q9Y616 596 aa9.9□□□□□ -0.83
HMGCLL1-206ENST00000428842 DOCK8Q8NF50 2099 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 ATP8B3O60423 1300 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 TSPAN3O60637 253 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 DAB1O75553 588 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 PRAMEF12O95522 483 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 RHOP08100 348 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 NOS2P35228 1153 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 EPHB3P54753 998 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 RPL10AP62906 217 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 TPGS2Q68CL5 300 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 TTC8Q8TAM2 541 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 DEPDC1BQ8WUY9 529 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLC46A2Q9BY10 475 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 CEP41Q9BYV8 373 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 DDX47Q9H0S4 455 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 FAM124BQ9H5Z6 455 aaPredicted RBP9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 WDR35Q9P2L0 1181 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 AP4E1Q9UPM8 1137 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 PCDHA3Q9Y5H8 950 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 NCOR1O75376 2440 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 DENND4CQ5VZ89 1909 aa9.89□□□□□ -0.83
HMGCLL1-206ENST00000428842 MAP2K7O14733 419 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 PRPSAP2O60256 369 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 TBX10O75333 385 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 MOSPD3O75425 235 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 F11P03951 625 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 PECAM1P16284 738 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 CEBPBP17676 345 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 AMPD1P23109 780 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 BMP8BP34820 402 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 HADHBP55084 474 aaKnown RBP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 PIGHQ14442 188 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 TRIP13Q15645 432 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 WHAMMP3Q1A5X7 153 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 C1orf228Q6PIY5 440 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 TFAP2DQ7Z6R9 452 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 MON1AQ86VX9 555 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 DENND1CQ8IV53 801 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 GLIS1Q8NBF1 620 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms