RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 VPS33BQ9H267 617 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D13Q9NVG8 400 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 TRIM10Q9UDY6 481 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 CDC23Q9UJX2 597 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 DRG1Q9Y295 367 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 IQSEC2Q5JU85 1478 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 HAUS5O94927 633 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ECDO95905 644 aaPredicted RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 ICAM1P05362 532 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ASGR1P07306 291 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ACO1P21399 889 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 KELP23276 732 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 NTSP30990 170 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 CCNG1P51959 295 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 BACE1P56817 501 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 BCL2L1Q07817 233 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 RGMBQ6NW40 437 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 TAF2Q6P1X5 1199 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 MPZL3Q6UWV2 235 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 IFNL1Q8IU54 200 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GUF1Q8N442 669 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 MAP4K1Q92918 833 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 PANX2Q96RD6 677 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 FHDC1Q9C0D6 1143 aaPredicted RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 NIF3L1Q9GZT8 377 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 RSAD1Q9HA92 442 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ZNF536O15090 1300 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 SGTAO43765 313 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 PMPCBO75439 489 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 CXCL14O95715 111 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 SERPINB3P29508 390 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 RPL9P32969 192 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 IFNGR2P38484 337 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 BCAT1P54687 386 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 OASLQ15646 514 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 SNRNP35Q16560 246 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 LAYNQ6UX15 382 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 P3H2Q8IVL5 708 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GPR135Q8IZ08 494 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 MYCBPAPQ8TBZ2 947 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 CBWD1Q9BRT8 395 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 RERGLQ9H628 205 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 KIAA1257Q9ULG3 409 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 SLC27A6Q9Y2P4 619 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GTPBP1O00178 669 aaKnown RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 CACNB4O00305 520 aaPredicted RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 TM9SF1O15321 606 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 NMT2O60551 498 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 MLYCDO95822 493 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 GHRP10912 638 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 NFKB1P19838 968 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 USP4Q13107 963 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 NCF4Q15080 339 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 DGKKQ5KSL6 1271 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 PLPP4Q5VZY2 271 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 TMEM154Q6P9G4 183 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 SERPINA13PQ6UXR4 307 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 FAM20CQ8IXL6 584 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 DNAJB3Q8WWF6 145 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 CPA5Q8WXQ8 436 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 RAD21L1Q9H4I0 556 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 RAB6BQ9NRW1 208 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 ZNF510Q9Y2H8 683 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 SIK3Q9Y2K2 1263 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 RBM7Q9Y580 266 aaKnown RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 HEMK1Q9Y5R4 338 aaPredicted RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 RFX7Q2KHR2 1363 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 FAM187AA6NFU0 413 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 PLA2G6O60733 806 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 DSG3P32926 999 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 RPIAP49247 311 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 CTCFP49711 727 aaPredicted RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.88□□□□□ -1.47
HERC4-206ENST00000427635 ILF2Q12905 390 aaKnown RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 CFAP161Q6P656 301 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 CLIP3Q96DZ5 547 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 APBA2Q99767 749 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 TTLL2Q9BWV7 592 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 GLIS2Q9BZE0 524 aaPredicted RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 IL1RAPL1Q9NZN1 696 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 LUZP4Q9P127 313 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 STAP2Q9UGK3 403 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 ADAMTS1Q9UHI8 967 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 AK9Q5TCS8 1911 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 TRPC5OSA6NMA1 111 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 DAB1O75553 588 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 NDUFA10O95299 355 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 THEGLP0DJG4 465 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 GFPT1Q06210 699 aaPredicted RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 ZNF543Q08ER8 600 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 GRIK3Q13003 919 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 TUBA3CQ13748 450 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 NUGGCQ68CJ6 796 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 NEK5Q6P3R8 708 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 ZNF677Q86XU0 584 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 ANKMY2Q8IV38 441 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 RASGEF1AQ8N9B8 481 aa5.88□□□□□ -1.47
HERC4-206ENST00000427635 TMA16Q96EY4 203 aaKnown RBP5.88□□□□□ -1.47
HERC4-206ENST00000427635 ZDHHC15Q96MV8 337 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms