RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 PSD3Q9NYI0 1048 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 MAP3K6O95382 1288 aa27.56■■■□□ 2
SH3GL3-202ENST00000427482 RBL1P28749 1068 aa27.56■■■□□ 2
SH3GL3-202ENST00000427482 NRLP54845 237 aa27.56■■■□□ 2
SH3GL3-202ENST00000427482 YWHAGP61981 247 aaKnown RBP eCLIP27.56■■■□□ 2
SH3GL3-202ENST00000427482 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.56■■■□□ 27e-7■■■■□ 22.4
SH3GL3-202ENST00000427482 TAC4Q86UU9 113 aa27.56■■■□□ 2
SH3GL3-202ENST00000427482 DQX1Q8TE96 717 aaKnown RBP27.56■■■□□ 2
SH3GL3-202ENST00000427482 C8orf48Q96LL4 319 aa27.56■■■□□ 2
SH3GL3-202ENST00000427482 ATP11BQ9Y2G3 1177 aa27.56■■■□□ 2
SH3GL3-202ENST00000427482 I6L893 689 aaPredicted RBP27.55■■■□□ 2
SH3GL3-202ENST00000427482 TRIM66O15016 1216 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 KCNN4O15554 427 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 ACSL3O95573 720 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 MAGEA11P43364 429 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 IFRD2Q12894 506 aaPredicted RBP27.55■■■□□ 2
SH3GL3-202ENST00000427482 SEMA3BQ13214 749 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 ARL13BQ3SXY8 428 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 CNKSR3Q6P9H4 555 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 NAT8LQ8N9F0 302 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 UHMK1Q8TAS1 419 aaKnown RBP27.55■■■□□ 2
SH3GL3-202ENST00000427482 DTLQ9NZJ0 730 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 MFHAS1Q9Y4C4 1052 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 NT5C1B-RDH14C9J2C7 533 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 IGLV3-25P01717 112 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 DPYSQ14117 519 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 KYNUQ16719 465 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 SLC45A4Q5BKX6 768 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 CROCCP2Q86T23 111 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 TMEM173Q86WV6 379 aaPredicted RBP27.55■■■□□ 2
SH3GL3-202ENST00000427482 PRDM10Q9NQV6 1147 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 ABCC13Q9NSE7 274 aa27.55■■■□□ 2
SH3GL3-202ENST00000427482 GREB1Q4ZG55 1949 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 COL4A6Q14031 1691 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 SMAPO00193 183 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 EEF2KO00418 725 aaKnown RBP27.54■■■□□ 2
SH3GL3-202ENST00000427482 CREB3O43889 395 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 AMHP03971 560 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 PBX3P40426 434 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 MAGEA4P43358 317 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 IKBKEQ14164 716 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 ANKRD22Q5VYY1 191 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 VWCEQ96DN2 955 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 OLFM3Q96PB7 478 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 QKIQ96PU8 341 aaKnown RBP eCLIP27.54■■■□□ 24e-6■■■□□ 15.3
SH3GL3-202ENST00000427482 SAYSD1Q9NPB0 183 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 TMEM39AQ9NV64 488 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 PAK5Q9P286 719 aa27.54■■■□□ 2
SH3GL3-202ENST00000427482 BTBD8Q5XKL5 378 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 FBXO46Q6PJ61 603 aaPredicted RBP27.53■■■□□ 2
SH3GL3-202ENST00000427482 RFX8Q6ZV50 586 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 SCD5Q86SK9 330 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 NUP93Q8N1F7 819 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 BCL7CQ8WUZ0 217 aaPredicted RBP27.53■■■□□ 2
SH3GL3-202ENST00000427482 PGLYRP2Q96PD5 576 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 PHACTR1Q9C0D0 580 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 WDCPQ9H6R7 721 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 TBC1D4O60343 1298 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 ACTN2P35609 894 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 GPR15P49685 360 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 EIF4EBP2Q13542 120 aaPredicted RBP27.53■■■□□ 2
SH3GL3-202ENST00000427482 RTP2Q5QGT7 225 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 KCNT2Q6UVM3 1135 aa27.53■■■□□ 2
SH3GL3-202ENST00000427482 BZW1Q7L1Q6 419 aaKnown RBP27.53■■■□□ 2
SH3GL3-202ENST00000427482 FAM72CH0Y354 149 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 H7C4K7 107 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 MFSD11O43934 449 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 DGKIO75912 1065 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 UPP2O95045 317 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 CLTBP09497 229 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 RFC2P35250 354 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 HCAR3P49019 387 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 DDR2Q16832 855 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 FAM72AQ5TYM5 149 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 FAM72DQ6L9T8 149 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 FAM72BQ86X60 149 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 TAB3Q8N5C8 712 aaPredicted RBP27.52■■■□□ 2
SH3GL3-202ENST00000427482 ARMC5Q96C12 935 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 C9orf72Q96LT7 481 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 TKTL2Q9H0I9 626 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 BCCIPQ9P287 314 aaKnown RBP eCLIP27.52■■■□□ 2
SH3GL3-202ENST00000427482 SCML2Q9UQR0 700 aa27.52■■■□□ 2
SH3GL3-202ENST00000427482 HACD1B0YJ81 288 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 DCLK1O15075 740 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 NR1D1P20393 614 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 PGFP49763 221 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 BASP1P80723 227 aaKnown RBP27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 PAFAH1B3Q15102 231 aaKnown RBP27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 EMC10Q5UCC4 262 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 SDHAF4Q5VUM1 108 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 CENPUQ71F23 418 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 TTC9BQ8N6N2 239 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 ANKLE1Q8NAG6 615 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 ATAD1Q8NBU5 361 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 PGM2Q96G03 612 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 ROPN1BQ9BZX4 212 aaPredicted RBP27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 SMOC2Q9H3U7 446 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 ROPN1Q9HAT0 212 aaPredicted RBP27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 NMUR1Q9HB89 426 aa27.51■■□□□ 1.99
SH3GL3-202ENST00000427482 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms