RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 M0QYT0 321 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 PDGFRAP16234 1089 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 ABCB4P21439 1286 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 FECHP22830 423 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 SLC44A4Q53GD3 710 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 DENND1CQ8IV53 801 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 TTC8Q8TAM2 541 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 ATP2A3Q93084 1043 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 TBCBQ99426 244 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 HEBP1Q9NRV9 189 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 SPTLC3Q9NUV7 552 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 FBXL21Q9UKT6 434 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 ZNF510Q9Y2H8 683 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 SYNJ2BP-COX16A0A087WUM0 186 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 GBP1P32455 592 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 SULT1E1P49888 294 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 RPL7AP62424 266 aaKnown RBP25.48■■□□□ 1.67
VEGFA-209ENST00000425836 SIGLEC14Q08ET2 396 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 UNC45BQ8IWX7 931 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 MCEEQ96PE7 176 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 THAP2Q9H0W7 228 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 ECT2Q9H8V3 914 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 COX16Q9P0S2 106 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 CA14Q9ULX7 337 aa25.48■■□□□ 1.67
VEGFA-209ENST00000425836 MRE11P49959 708 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 GALCP54803 685 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 NME3Q13232 169 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 ITPRIPL2Q3MIP1 535 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 CCDC14Q49A88 953 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 ZC3H12AQ5D1E8 599 aaKnown RBP25.47■■□□□ 1.67
VEGFA-209ENST00000425836 NUGGCQ68CJ6 796 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 PGAP3Q96FM1 320 aaPredicted RBP25.47■■□□□ 1.67
VEGFA-209ENST00000425836 EPHX3Q9H6B9 360 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 MYO1AQ9UBC5 1043 aa25.47■■□□□ 1.67
VEGFA-209ENST00000425836 NFATC1O95644 943 aa25.46■■□□□ 1.67
VEGFA-209ENST00000425836 DHCR24Q15392 516 aa25.46■■□□□ 1.67
VEGFA-209ENST00000425836 DCUN1D2Q6PH85 259 aa25.46■■□□□ 1.67
VEGFA-209ENST00000425836 RHBDF2Q6PJF5 856 aa25.46■■□□□ 1.67
VEGFA-209ENST00000425836 TRIM67Q6ZTA4 783 aa25.46■■□□□ 1.67
VEGFA-209ENST00000425836 BNIPLQ7Z465 357 aa25.46■■□□□ 1.67
VEGFA-209ENST00000425836 PIGVQ9NUD9 493 aa25.46■■□□□ 1.67
VEGFA-209ENST00000425836 HELZP42694 1942 aaKnown RBP25.46■■□□□ 1.67
VEGFA-209ENST00000425836 KRBA1A5PL33 1030 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 ANKRD62A6NC57 917 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 GOLGA6L6A8MZA4 724 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 GPD1P21695 349 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 SDC4P31431 198 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 TMTC1Q8IUR5 882 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 CCDC170Q8IYT3 715 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 CPA6Q8N4T0 437 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 ARHGEF3Q9NR81 526 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.45■■□□□ 1.662e-7■■■■□ 22.2
VEGFA-209ENST00000425836 STOML2Q9UJZ1 356 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 SCINQ9Y6U3 715 aa25.45■■□□□ 1.66
VEGFA-209ENST00000425836 LATS1O95835 1130 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 CYP17A1P05093 508 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 PTPN9P43378 593 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 SOX9P48436 509 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 ATP11AP98196 1134 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 DEUP1Q05D60 604 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 MLF2Q15773 248 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-209ENST00000425836 C15orf59Q2T9L4 293 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-209ENST00000425836 SIX5Q8N196 739 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 RNF34Q969K3 372 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 AZIN2Q96A70 460 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 PACSIN1Q9BY11 444 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 PIAS3Q9Y6X2 628 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 TMEM191CA6NGB0 347 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 KCNU1A8MYU2 1149 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 ENDOD1O94919 500 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 F9P00740 461 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 APOEP02649 317 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 CYP1A2P05177 515 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 SLC2A3P11169 496 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 CCR1P32246 355 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 CXCR3P49682 368 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 ZNF143P52747 638 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-209ENST00000425836 ATXN1P54253 815 aaKnown RBP25.44■■□□□ 1.66
VEGFA-209ENST00000425836 MLLT6P55198 1093 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-209ENST00000425836 OGDHQ02218 1023 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 LY6G5CQ5SRR4 150 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 SH3PXD2AQ5TCZ1 1133 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 TMEM25Q86YD3 366 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 FAM217AQ8IXS0 508 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 ARHGEF26Q96DR7 871 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 MRPL47Q9HD33 250 aaKnown RBP25.44■■□□□ 1.66
VEGFA-209ENST00000425836 SPHK2Q9NRA0 654 aa25.44■■□□□ 1.66
VEGFA-209ENST00000425836 SOWAHDA6NJG2 315 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 ACSL4O60488 711 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 H2AFZP0C0S5 128 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 GLULP15104 373 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 RDXP35241 583 aaKnown RBP25.43■■□□□ 1.66
VEGFA-209ENST00000425836 CHKAP35790 457 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 SLC11A2P49281 568 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 NR1H3Q13133 447 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 GSE1Q14687 1217 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 PPP2R5DQ14738 602 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 RAB6CQ53S08 254 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 ADGRF1Q5T601 910 aa25.43■■□□□ 1.66
VEGFA-209ENST00000425836 H2AFVQ71UI9 128 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms