RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 HCSTQ9UBK5 93 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 MAD1L1Q9Y6D9 718 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 XIRP2A4UGR9 3374 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 SCN10AQ9Y5Y9 1956 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 NUP205Q92621 2012 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 USP12O75317 370 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 TCEA3O75764 348 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 CA4P22748 312 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 RNASELQ05823 741 aaKnown RBP9.11□□□□□ -0.95
SNCA-206ENST00000420646 DEUP1Q05D60 604 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 EFHC1Q5JVL4 640 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 CD300LGQ6UXG3 332 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 RTN4RL1Q86UN2 441 aaPredicted RBP9.11□□□□□ -0.95
SNCA-206ENST00000420646 ZDHHC17Q8IUH5 632 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 CTAGE3PQ8IX95 158 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 GPR152Q8TDT2 470 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 TEKT4Q8WW24 435 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 MYLPFQ96A32 169 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 CENPTQ96BT3 561 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 TGS1Q96RS0 853 aaKnown RBP9.11□□□□□ -0.95
SNCA-206ENST00000420646 ZNF670Q9BS34 389 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 DDIT4Q9NX09 232 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 LGALS13Q9UHV8 139 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 FZD10Q9ULW2 581 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 TRPM7Q96QT4 1865 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 GPR182O15218 404 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 RPL34P49207 117 aaKnown RBP9.11□□□□□ -0.95
SNCA-206ENST00000420646 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
SNCA-206ENST00000420646 MBTPS1Q14703 1052 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 CES3Q6UWW8 571 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 PCGF5Q86SE9 256 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 CD99L2Q8TCZ2 262 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 RNF139Q8WU17 664 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 AGAP3Q96P47 875 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 NPY6RQ99463 290 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 ZMYND8Q9ULU4 1186 aaPredicted RBP9.11□□□□□ -0.95
SNCA-206ENST00000420646 USP3Q9Y6I4 520 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 TEX264Q9Y6I9 313 aa9.11□□□□□ -0.95
SNCA-206ENST00000420646 KIAA0754O94854 1291 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 TOP3BO95985 862 aaKnown RBP9.1□□□□□ -0.95
SNCA-206ENST00000420646 ABHD2P08910 425 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 PBX3P40426 434 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 ACADSBP45954 432 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 VEGFBP49765 207 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SLC20A2Q08357 652 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 BMPR2Q13873 1038 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 CCSAPQ6IQ19 270 aaPredicted RBP9.1□□□□□ -0.95
SNCA-206ENST00000420646 PPM1NQ8N819 430 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 PDCD7Q8N8D1 485 aaKnown RBP9.1□□□□□ -0.95
SNCA-206ENST00000420646 ATP11CQ8NB49 1132 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 TTC25Q96NG3 672 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 POPDC2Q9HBU9 364 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SMYD2Q9NRG4 433 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 ABCF3Q9NUQ8 709 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNCA-206ENST00000420646 SLC17A7Q9P2U7 560 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 PRG3Q9Y2Y8 225 aaPredicted RBP9.1□□□□□ -0.95
SNCA-206ENST00000420646 CAPN7Q9Y6W3 813 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 ZNF236Q9UL36 1845 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SZT2Q5T011 3432 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 A0A0U1RQF3 1178 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 C5orf60A6NFR6 353 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 FAM47DPA6NHR8 397 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 E7ESA3 106 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SRGAP2BP0DMP2 458 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 TGM2P21980 687 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 GMPRP36959 345 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 ARL4AP40617 200 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 LBX1P52954 281 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 DAOAP59103 153 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 FAAP100Q0VG06 881 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SLC45A4Q5BKX6 768 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 FAM133BQ5BKY9 247 aaKnown RBP9.1□□□□□ -0.95
SNCA-206ENST00000420646 HEATR6Q6AI08 1181 aaKnown RBP9.1□□□□□ -0.95
SNCA-206ENST00000420646 CGB2Q6NT52 195 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 ZNF534Q76KX8 674 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 CROCCP2Q86T23 111 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 DCAKDQ8WVC6 231 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SERAC1Q96JX3 654 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SIK2Q9H0K1 926 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 PRDM12Q9H4Q4 367 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 SLC38A7Q9NVC3 462 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 NKIRAS1Q9NYS0 192 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 DNAJB4Q9UDY4 337 aa9.1□□□□□ -0.95
SNCA-206ENST00000420646 GOLGA6L7A0A1B0GV03 622 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 DDHD2O94830 711 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 ADRA1DP25100 572 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 NOS2P35228 1153 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 MSH2P43246 934 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 SNX16P57768 344 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 SESN2P58004 480 aaPredicted RBP9.09□□□□□ -0.95
SNCA-206ENST00000420646 SP3Q02447 781 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 CASC4Q6P4E1 433 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 NPWQ8N729 165 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 KLHDC9Q8NEP7 349 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 CKAP2Q8WWK9 683 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 P2RY11Q96G91 374 aa9.09□□□□□ -0.95
SNCA-206ENST00000420646 CELF6Q96J87 481 aaKnown RBP9.09□□□□□ -0.95
SNCA-206ENST00000420646 SMC6Q96SB8 1091 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms