RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 TBX4P57082 545 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 COPS2P61201 443 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 SLC7A9P82251 487 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 COG7P83436 770 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 TAZQ16635 292 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 ARL13BQ3SXY8 428 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 ATP13A4Q4VNC1 1196 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 DCAF12L1Q5VU92 463 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 TMC5Q6UXY8 1006 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 FAM131BQ86XD5 332 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 VSIG1Q86XK7 387 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 ZNF592Q92610 1267 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 FCRL2Q96LA5 508 aaPredicted RBP14.81□□□□□ -0.04
SF3B1-204ENST00000414963 HAPLN3Q96S86 360 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 GAS2L1Q99501 681 aaPredicted RBP14.81□□□□□ -0.04
SF3B1-204ENST00000414963 KLF16Q9BXK1 252 aaPredicted RBP14.81□□□□□ -0.04
SF3B1-204ENST00000414963 S1PR5Q9H228 398 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 ADAM7Q9H2U9 754 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 PIDD1Q9HB75 910 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 CLEC1BQ9P126 229 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 RASAL2Q9UJF2 1139 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 FZD10Q9ULW2 581 aa14.81□□□□□ -0.04
SF3B1-204ENST00000414963 MYO16Q9Y6X6 1858 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 TRAV19A0A0A6YYK7 116 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 SLC12A8A0AV02 714 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ZNF487B1APH4 448 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 KCNK3O14649 394 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 MSI1O43347 362 aaKnown RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ZRANB2O95218 330 aaKnown RBP eCLIP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 PYGMP11217 842 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ITIH3Q06033 890 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 PDK2Q15119 407 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 DPYSL2Q16555 572 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 SLC5A9Q2M3M2 681 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ARHGAP15Q53QZ3 475 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ZC3H12AQ5D1E8 599 aaKnown RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 RARS2Q5T160 578 aaKnown RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ACBD5Q5T8D3 534 aaPredicted RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 TXNDC8Q6A555 127 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 MIB1Q86YT6 1006 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 UNC45BQ8IWX7 931 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 CCDC185Q8N715 623 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 AZIN2Q96A70 460 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 PABPC5Q96DU9 382 aaKnown RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 TCEAL4Q96EI5 215 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ZFRQ96KR1 1074 aaKnown RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 SNRNP25Q9BV90 132 aaKnown RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 SLC46A2Q9BY10 475 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 NACA2Q9H009 215 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 OSBPL2Q9H1P3 480 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 TASP1Q9H6P5 420 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 ZWILCHQ9H900 591 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 RNF14Q9UBS8 474 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 TTC7AQ9ULT0 858 aaPredicted RBP14.8□□□□□ -0.04
SF3B1-204ENST00000414963 MYO9BQ13459 2157 aa14.8□□□□□ -0.04
SF3B1-204ENST00000414963 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 C3orf70A6NLC5 250 aaPredicted RBP14.79□□□□□ -0.04
SF3B1-204ENST00000414963 I6L893 689 aaPredicted RBP14.79□□□□□ -0.04
SF3B1-204ENST00000414963 L1CAMP32004 1257 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 PTPN7P35236 360 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 LTBRP36941 435 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 ZNF135P52742 658 aaPredicted RBP14.79□□□□□ -0.04
SF3B1-204ENST00000414963 NTHL1P78549 312 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 CYP4F8P98187 520 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 NRG1Q02297 640 aaPredicted RBP14.79□□□□□ -0.04
SF3B1-204ENST00000414963 TEAD2Q15562 447 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 KCNT1Q5JUK3 1230 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 NUGGCQ68CJ6 796 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 MAP7D3Q8IWC1 876 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 RASGEF1CQ8N431 466 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 ARL14EPQ8N8R7 260 aaPredicted RBP14.79□□□□□ -0.04
SF3B1-204ENST00000414963 KCTD6Q8NC69 237 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 COG1Q8WTW3 980 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 RAPGEF5Q92565 580 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 RNF34Q969K3 372 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 PLD4Q96BZ4 506 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 RBM41Q96IZ5 413 aaKnown RBP14.79□□□□□ -0.04
SF3B1-204ENST00000414963 MSLNLQ96KJ4 702 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 C1orf74Q96LT6 269 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 SLC22A12Q96S37 553 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 CYP2S1Q96SQ9 504 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 TKTL2Q9H0I9 626 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 TRPC7Q9HCX4 862 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 ANLNQ9NQW6 1124 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 MTMR10Q9NXD2 777 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 SLC12A6Q9UHW9 1150 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 AP4E1Q9UPM8 1137 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 EFR3BQ9Y2G0 817 aa14.79□□□□□ -0.04
SF3B1-204ENST00000414963 MRPS23Q9Y3D9 190 aaKnown RBP14.79□□□□□ -0.04
SF3B1-204ENST00000414963 PRRC2BQ5JSZ5 2229 aaKnown RBP14.78□□□□□ -0.04
SF3B1-204ENST00000414963 URI1O94763 535 aaPredicted RBP14.78□□□□□ -0.04
SF3B1-204ENST00000414963 APOEP02649 317 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 KRT1P04264 644 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 GJA1P17302 382 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 IGFBP4P22692 258 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 KDELR1P24390 212 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 CXCR5P32302 372 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 HCAR3P49019 387 aa14.78□□□□□ -0.04
SF3B1-204ENST00000414963 MLLT6P55198 1093 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms