RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SYNE3Q6ZMZ3 975 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 RTL10Q7L3V2 364 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 WDTC1Q8N5D0 677 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 APPL2Q8NEU8 664 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 OR8H1Q8NGG4 311 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 OR5M3Q8NGP4 307 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 SLC35B2Q8TB61 432 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 KLHL32Q96NJ5 620 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 LENG8Q96PV6 779 aaPredicted RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 NR1H4Q96RI1 486 aaPredicted RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 MECRQ9BV79 373 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 MAK16Q9BXY0 300 aaKnown RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 IMPG2Q9BZV3 1241 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 TTYH3Q9C0H2 523 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 GSTO2Q9H4Y5 243 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 PDE7BQ9NP56 450 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 SEMA4BQ9NPR2 832 aaPredicted RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 BEX4Q9NWD9 120 aaPredicted RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 FAM30AQ9NZY2 134 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 VPS51Q9UID3 782 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 SARDHQ9UL12 918 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 CORO1CQ9ULV4 474 aaPredicted RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 SUFUQ9UMX1 484 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 RUSC2Q8N2Y8 1516 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 CDHR4A6H8M9 788 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 SLC38A8A6NNN8 435 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 DCLK1O15075 740 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 CD3EAPO15446 510 aaKnown RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 SLC7A4O43246 635 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TNFSF14O43557 240 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 POMCP01189 267 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 AFPP02771 609 aaKnown RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 SPARCP09486 303 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 WEE2P0C1S8 567 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TNNT1P13805 278 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TBXAS1P24557 533 aaPredicted RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 PRKCHP24723 683 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 EEF1DP29692 281 aaKnown RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 GCH1P30793 250 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 RAD23AP54725 363 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 BPIFB3P59826 476 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 RBP5P82980 135 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 AIMP1Q12904 312 aaKnown RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 BFSP1Q12934 665 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TDGQ13569 410 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 PCOLCEQ15113 449 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 ZIK1Q3SY52 487 aaPredicted RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 TTC31Q49AM3 519 aaPredicted RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 ZNF569Q5MCW4 686 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 ERICH6BQ5W0A0 696 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 KAZNQ674X7 775 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 KRT40Q6A162 431 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 FAM83HQ6ZRV2 1179 aaPredicted RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 CCDC91Q7Z6B0 441 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 PLEKHH3Q7Z736 793 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 ZNF280BQ86YH2 543 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 CEP97Q8IW35 865 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 HSCBQ8IWL3 235 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 LMNTD2Q8IXW0 634 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 KBTBD2Q8IY47 623 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 PDPRQ8NCN5 879 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 MGARPQ8TDB4 240 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TBC1D31Q96DN5 1066 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 ZNF845Q96IR2 970 aaPredicted RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 PPP1R10Q96QC0 940 aaKnown RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 WDR24Q96S15 920 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 BDH2Q9BUT1 245 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TRIM5Q9C035 493 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 XPO4Q9C0E2 1151 aaKnown RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 SMARCAD1Q9H4L7 1026 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 TRPV4Q9HBA0 871 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 MRPS18AQ9NVS2 196 aaKnown RBP5.31□□□□□ -1.56
LSM5-205ENST00000409952 USP22Q9UPT9 525 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 FAM169AQ9Y6X4 670 aa5.31□□□□□ -1.56
LSM5-205ENST00000409952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 A0A1W2PQ09 198 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 GAGE10A6NGK3 116 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 LIPT2A6NK58 231 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 HNRNPRO43390 633 aaKnown RBP5.3□□□□□ -1.56
LSM5-205ENST00000409952 ADAM20O43506 726 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 VPS4BO75351 444 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 PPARGP37231 505 aaPredicted RBP5.3□□□□□ -1.56
LSM5-205ENST00000409952 PNPLA4P41247 253 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 GARSP41250 739 aaKnown RBP5.3□□□□□ -1.56
LSM5-205ENST00000409952 MRE11P49959 708 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 DGKEP52429 567 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 PPP5CP53041 499 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 CLRN1P58418 232 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 BPIFB4P59827 614 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 RAP2BP61225 183 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 TMF1P82094 1093 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 TFCP2Q12800 502 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 MYO1EQ12965 1108 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 BOP1Q14137 746 aaKnown RBP5.3□□□□□ -1.56
LSM5-205ENST00000409952 COG2Q14746 738 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 PKN2Q16513 984 aaKnown RBP5.3□□□□□ -1.56
LSM5-205ENST00000409952 GAGE13Q4V321 117 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 ODF2Q5BJF6 829 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 MSANTD2Q6P1R3 559 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms