RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 NME1P15531 152 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 EEF1GP26641 437 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 RABIFP47224 123 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 LMAN1P49257 510 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAAP100Q0VG06 881 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 SF3A3Q12874 501 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 STIM1Q13586 685 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 TRADDQ15628 312 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 MAPKAPK3Q16644 382 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 HERC4Q5GLZ8 1057 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 TCERG1LQ5VWI1 586 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 APOBEC3HQ6NTF7 200 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 NFRKBQ6P4R8 1299 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GJB7Q6PEY0 223 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ISLR2Q6UXK2 745 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GPR149Q86SP6 731 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 OR8K1Q8NGG5 319 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 LARP4BQ92615 738 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CGRRF1Q99675 332 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 NAPGQ99747 312 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 COLEC11Q9BWP8 271 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 C1QTNF2Q9BXJ5 285 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 FOXP3Q9BZS1 431 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 MS4A5Q9H3V2 200 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 TASP1Q9H6P5 420 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 NHEJ1Q9H9Q4 299 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 TOR4AQ9NXH8 423 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 IL20Q9NYY1 176 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 HSPBP1Q9NZL4 362 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 WHRNQ9P202 907 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 VPS18Q9P253 973 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 HYOU1Q9Y4L1 999 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PCDHA11Q9Y5I1 949 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 BACE2Q9Y5Z0 518 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PIAS3Q9Y6X2 628 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLX4Q8IY92 1834 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM234BA2RU67 622 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 LRRC53A6NM62 1247 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 HNRNPA1P09651 372 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 DPEP1P16444 411 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GNA11P29992 359 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ARCN1P48444 511 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GNAQP50148 359 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ACTR1AP61163 376 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 KCNJ10P78508 379 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PRKCZQ05513 592 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PTPN11Q06124 597 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CCDC40Q4G0X9 1142 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 MIIPQ5JXC2 388 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 HHIPL2Q6UWX4 724 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 NLRC3Q7RTR2 1065 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ACER1Q8TDN7 264 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 HAS1Q92839 578 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM120BQ96EK7 910 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZC3H10Q96K80 434 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CTAGE1Q96RT6 745 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 BCL7BQ9BQE9 202 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 FUT8Q9BYC5 575 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GLIS2Q9BZE0 524 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PIN4Q9Y237 131 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 TMEM5Q9Y2B1 443 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CLDN16Q9Y5I7 305 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GAKO14976 1311 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 SMCHD1A6NHR9 2005 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 TIAM2Q8IVF5 1701 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 EFCAB8A8MWE9 144 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 CETN3O15182 167 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 ADAM20O43506 726 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLC25A17O43808 307 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM155BO75949 473 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 PRPF6O94906 941 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 FTCDO95954 541 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 SCGB1D1O95968 90 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 PLGP00747 810 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 LTA4HP09960 611 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 CYP11B2P19099 503 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 CCNHP51946 323 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF143P52747 638 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 UBE3AQ05086 875 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 CBX3Q13185 183 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 DUSP28Q4G0W2 176 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM47CQ5HY64 1035 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 RBM20Q5T481 1227 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 CDCP2Q5VXM1 449 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 KRT79Q5XKE5 535 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 ADGRG6Q86SQ4 1221 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM160B2Q86V87 743 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 GPBP1Q86WP2 473 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 SP8Q8IXZ3 490 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 TEKT4Q8WW24 435 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 ATP6V0A1Q93050 837 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 CNKSR1Q969H4 720 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 PDLIM5Q96HC4 596 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 TUBA1CQ9BQE3 449 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 PACSIN1Q9BY11 444 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 INTS2Q9H0H0 1204 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 ISCUQ9H1K1 167 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 LIN7BQ9HAP6 207 aa6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 POLMQ9NP87 494 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-202ENST00000399438 FBXO28Q9NVF7 368 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms