RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 IGLV3-25P01717 112 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 APODP05090 189 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 TPM2P07951 284 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 KRT9P35527 623 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 POLR2FP61218 127 aaKnown RBP17.42■□□□□ 0.38
APTR-201ENST00000398043 KDSRQ06136 332 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 RING1Q06587 406 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 SYCP1Q15431 976 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 TAF5Q15542 800 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 PTPN20Q4JDL3 420 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 EMC10Q5UCC4 262 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 NOP9Q86U38 636 aaKnown RBP17.42■□□□□ 0.38
APTR-201ENST00000398043 TERB1Q8NA31 727 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 EPS8L1Q8TE68 723 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 PPP1R13BQ96KQ4 1090 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 DEC1Q9P2X7 70 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 NOCTQ9UK39 431 aaKnown RBP17.42■□□□□ 0.38
APTR-201ENST00000398043 THADAQ6YHU6 1953 aa17.42■□□□□ 0.38
APTR-201ENST00000398043 MUC22E2RYF6 1773 aaPredicted RBP17.41■□□□□ 0.38
APTR-201ENST00000398043 GFRA3O60609 400 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 ERBB2P04626 1255 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 NCAM1P13591 858 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 FNTBP49356 437 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 ZNF165P49910 485 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 SEC13P55735 322 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 YWHAZP63104 245 aaKnown RBP17.41■□□□□ 0.38
APTR-201ENST00000398043 MRPS21P82921 87 aaKnown RBP17.41■□□□□ 0.38
APTR-201ENST00000398043 NNTQ13423 1086 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 C2orf27AQ580R0 203 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 OLFML1Q6UWY5 402 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 TOGARAM2Q6ZUX3 1019 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 IL17RCQ8NAC3 791 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 ANKRD20A12PQ8NF67 263 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 CCDC26Q8TAB7 109 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 ATRIPQ8WXE1 791 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 FCRL2Q96LA5 508 aaPredicted RBP17.41■□□□□ 0.38
APTR-201ENST00000398043 SLC2A13Q96QE2 648 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 EPC1Q9H2F5 836 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 POPDC2Q9HBU9 364 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 DNAJC17Q9NVM6 304 aaKnown RBP17.41■□□□□ 0.38
APTR-201ENST00000398043 ASNSD1Q9NWL6 643 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 PLK2Q9NYY3 685 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 MMP17Q9ULZ9 603 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 STARD13Q9Y3M8 1113 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 CFAP54Q96N23 3096 aa17.41■□□□□ 0.38
APTR-201ENST00000398043 CCDC163A0A0D9SF12 145 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 SYCE3A1L190 88 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 PRRT4C9JH25 899 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 HRO43593 1189 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 LMNAP02545 664 aaKnown RBP17.4■□□□□ 0.38
APTR-201ENST00000398043 GLI1P08151 1106 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 HNRNPLP14866 589 aaKnown RBP eCLIP17.4■□□□□ 0.382e-8■■■□□ 15.4
APTR-201ENST00000398043 CDK11BP21127 795 aaKnown RBP17.4■□□□□ 0.38
APTR-201ENST00000398043 SOX5P35711 763 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 GABRB2P47870 512 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 HARS2P49590 506 aaKnown RBP17.4■□□□□ 0.38
APTR-201ENST00000398043 PITX1P78337 314 aaPredicted RBP17.4■□□□□ 0.38
APTR-201ENST00000398043 UBXN1Q04323 297 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 DMC1Q14565 340 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 ADGRF1Q5T601 910 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 FAM183BPQ6ZVS7 135 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 TAC4Q86UU9 113 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 WDR5BQ86VZ2 330 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 LONP2Q86WA8 852 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 CAMKK1Q8N5S9 505 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 GOLGA1Q92805 767 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 AZIN2Q96A70 460 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 ACDQ96AP0 544 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 FAM149B1Q96BN6 582 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 XPO6Q96QU8 1125 aaKnown RBP17.4■□□□□ 0.38
APTR-201ENST00000398043 TRIM62Q9BVG3 475 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 NLRC4Q9NPP4 1024 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
APTR-201ENST00000398043 CLEC4EQ9ULY5 219 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 TLR6Q9Y2C9 796 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 SLC27A6Q9Y2P4 619 aa17.4■□□□□ 0.38
APTR-201ENST00000398043 SMTNL1A8MU46 457 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 TEX33O43247 280 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 ADAM23O75077 832 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 GFPT2O94808 682 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 MMEP08473 750 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 CHRNB2P17787 502 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 TBX4P57082 545 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 HSF5Q4G112 596 aaPredicted RBP17.39■□□□□ 0.37
APTR-201ENST00000398043 PREPLQ4J6C6 727 aaPredicted RBP17.39■□□□□ 0.37
APTR-201ENST00000398043 FAM133BQ5BKY9 247 aaKnown RBP17.39■□□□□ 0.37
APTR-201ENST00000398043 NADSYN1Q6IA69 706 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 GRAMD4Q6IC98 578 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 SLC26A9Q7LBE3 791 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 ALLCQ8N6M5 410 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.37
APTR-201ENST00000398043 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 BHMTQ93088 406 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 SERPINB11Q96P15 392 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 SLC8A2Q9UPR5 921 aa17.39■□□□□ 0.37
APTR-201ENST00000398043 TNRC6BQ9UPQ9 1833 aaKnown RBP17.38■□□□□ 0.37
APTR-201ENST00000398043 GON4LQ3T8J9 2241 aa17.38■□□□□ 0.37
APTR-201ENST00000398043 TBC1D3BA6NDS4 549 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms