RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 STILQ15468 1287 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 DUSP28Q4G0W2 176 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 CXCL17Q6UXB2 119 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 PQLC3Q8N755 202 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 HTR3CQ8WXA8 447 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 CCDC124Q96CT7 223 aaKnown RBP10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 FAM161BQ96MY7 647 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 KCNK16Q96T55 309 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 RHOBTB2Q9BYZ6 727 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 ULBP1Q9BZM6 244 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 KIAA1257Q9ULG3 409 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 STAP1Q9ULZ2 295 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 SLC12A4Q9UP95 1085 aa10.79□□□□□ -0.68
CPSF1P1-201ENST00000397477 UNC5CO95185 931 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 PGK1P00558 417 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 AQP5P55064 265 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 SEPT6Q14141 434 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 OLFML1Q6UWY5 402 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 UNC5AQ6ZN44 842 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 SMC1BQ8NDV3 1235 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 L3MBTL3Q96JM7 780 aaPredicted RBP10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 CSPG4P5Q96PW8 444 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 PRDM12Q9H4Q4 367 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 FARP1Q9Y4F1 1045 aaPredicted RBP10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 CSH1P0DML2 217 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 CSH2P0DML3 217 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 MUM1Q2TAK8 710 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 SYPL2Q5VXT5 272 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 CDHR3Q6ZTQ4 885 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 HFE2Q6ZVN8 426 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 TTC8Q8TAM2 541 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 ATXN3LQ9H3M9 355 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 PPME1Q9Y570 386 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 ACTL7BQ9Y614 415 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 RRN3P2A6NIE6 340 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 TNPO2O14787 897 aaKnown RBP10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 MFSD11O43934 449 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 LYPLA1O75608 230 aaPredicted RBP10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 UPP2O95045 317 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 CD4P01730 458 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 APOEP02649 317 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 FAM200BP0CF97 657 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 EPHB1P54762 984 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 SLC10A2Q12908 348 aaPredicted RBP10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 KYAT1Q16773 422 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 ANKRD20A2Q5SQ80 823 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 ANKRD20A1Q5TYW2 823 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 NXNQ6DKJ4 435 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 ADGRD1Q6QNK2 874 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 B3GALNT2Q8NCR0 500 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 STKLD1Q8NE28 680 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 DCAKDQ8WVC6 231 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 PRR11Q96HE9 360 aaPredicted RBP10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 TBC1D10AQ9BXI6 508 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 CCDC134Q9H6E4 229 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 STARD13Q9Y3M8 1113 aa10.78□□□□□ -0.68
CPSF1P1-201ENST00000397477 ATXN2Q99700 1313 aaKnown RBP10.77□□□□□ -0.68
CPSF1P1-201ENST00000397477 PHIPQ8WWQ0 1821 aa10.77□□□□□ -0.68
CPSF1P1-201ENST00000397477 B2RBV5 119 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 CLGNO14967 610 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 TCEA3O75764 348 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 BEST1O76090 585 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 PFKMP08237 780 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 DARSP14868 501 aaKnown RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 HOXA11P31270 313 aaPredicted RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 PGGT1BP53609 377 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 SOX4Q06945 474 aaPredicted RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 BST1Q10588 318 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 PPM1JQ5JR12 505 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 EFHC1Q5JVL4 640 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 FAM228AQ86W67 206 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 SLC25A41Q8N5S1 370 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 ANKRD52Q8NB46 1076 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 OR52K1Q8NGK4 314 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 PPP4R1Q8TF05 950 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 APOPT1Q96IL0 206 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 TSNARE1Q96NA8 513 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 WDR83Q9BRX9 315 aaKnown RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 FNDC3AQ9Y2H6 1198 aaKnown RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 MCM3APO60318 1980 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 STRNO43815 780 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 SKAP2O75563 359 aaPredicted RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 TKTP29401 623 aaKnown RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 AVPR1AP37288 418 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 ZNF157P51786 506 aaPredicted RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 STX3Q13277 289 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 SNX17Q15036 470 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 SV2CQ496J9 727 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 SLC45A4Q5BKX6 768 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 USP50Q70EL3 339 aaPredicted RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 TTC39CQ8N584 583 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 POU5F2Q8N7G0 328 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 RNF139Q8WU17 664 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 AZIN2Q96A70 460 aa10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 ALKBH8Q96BT7 664 aaKnown RBP10.77□□□□□ -0.69
CPSF1P1-201ENST00000397477 C17orf102A2RUQ5 167 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms