RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 MPP2Q14168 576 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 FNDC5Q8NAU1 212 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 GMCL1Q96IK5 515 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 COPS4Q9BT78 406 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 STX11O75558 287 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 B3GAT3O94766 335 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 HSD17B3P37058 310 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 STAT5AP42229 794 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 GEMP55040 296 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 SPIDRQ14159 915 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 SEL1L3Q68CR1 1132 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 RORBQ92753 470 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PPP1R2P1Q96PQ5 205 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 TRIM2Q9C040 744 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PTGFRNQ9P2B2 879 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 DNAJC16Q9Y2G8 782 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ZW10O43264 779 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 CSDE1O75534 798 aaKnown RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 GALCP54803 685 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 ITGA1P56199 1179 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 FAM98BQ52LJ0 330 aaKnown RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 SYDE1Q6ZW31 735 aaPredicted RBP12.64□□□□□ -0.39
SMU1-201ENST00000397149 SCUBE1Q8IWY4 988 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 RNF148Q8N7C7 305 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 OR5T3Q8NGG3 340 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 HPDLQ96IR7 371 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 AHSPQ9NZD4 102 aa12.64□□□□□ -0.39
SMU1-201ENST00000397149 PLB1Q6P1J6 1458 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 SLC12A8A0AV02 714 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 MCIDASD6RGH6 385 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 OR5F1O95221 314 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 PYHIN1Q6K0P9 492 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 STK32CQ86UX6 486 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ATP8B4Q8TF62 1192 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 TP53INP1Q96A56 240 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 NUAK2Q9H093 628 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ENTPD4Q9Y227 616 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 NDUFS2O75306 463 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 PRDX5P30044 214 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 AP1S1P61966 158 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 STRA8Q7Z7C7 330 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 CLVS1Q8IUQ0 354 aaPredicted RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 ARMC8Q8IUR7 673 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 GPER1Q99527 375 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 KLHL4Q9C0H6 718 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ARHGAP28Q9P2N2 729 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ANO9A1A5B4 782 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ODC1P11926 461 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 HNF4AP41235 474 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ACADSBP45954 432 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 GPR15P49685 360 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 FAPQ12884 760 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ITGB3BPQ13352 177 aaPredicted RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 GPAT3Q53EU6 434 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 MFSD7Q6UXD7 560 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 LDHDQ86WU2 507 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 LRRC6Q86X45 466 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 ATP6V1C2Q8NEY4 427 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 LPCAT1Q8NF37 534 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 COLEC11Q9BWP8 271 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 GPAMQ9HCL2 828 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 SH3GLB2Q9NR46 395 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 GPATCH2LQ9NWQ4 482 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 OR10H1Q9Y4A9 318 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 GTPBP1O00178 669 aaKnown RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 WRBO00258 174 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 TPD52L2O43399 206 aaKnown RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 GH1P01241 217 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 RESTQ13127 1097 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 CLEC4GQ6UXB4 293 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 DET1Q7L5Y6 550 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 MAGEE2Q8TD90 523 aaPredicted RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 CDADC1Q9BWV3 514 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 GSDMCQ9BYG8 508 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 COG5Q9UP83 839 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 OR10H2O60403 315 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ZNF806P0C7X5 589 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 MC1RQ01726 317 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ALG11Q2TAA5 492 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 PPP1R13LQ8WUF5 828 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 ELMO1Q92556 727 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 SEMA6AQ9H2E6 1030 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 PIH1D1Q9NWS0 290 aaKnown RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 UBA2Q9UBT2 640 aaPredicted RBP12.63□□□□□ -0.39
SMU1-201ENST00000397149 RAB23Q9ULC3 237 aa12.63□□□□□ -0.39
SMU1-201ENST00000397149 H7C1W4 665 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 KPNA4O00629 521 aaPredicted RBP12.62□□□□□ -0.39
SMU1-201ENST00000397149 NFKB1P19838 968 aa12.62□□□□□ -0.39
SMU1-201ENST00000397149 TMC7Q7Z402 723 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms