RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 HCRTO43612 131 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 ZNF623O75123 536 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 LRG1P02750 347 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 GOT1P17174 413 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 MXRA7P84157 204 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 LRRC14Q15048 493 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 IL31Q6EBC2 164 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 TMC7Q7Z402 723 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 ZCCHC9Q8N567 271 aaKnown RBP12.3□□□□□ -0.44
ATN1-202ENST00000396684 C12orf50Q8NA57 414 aaPredicted RBP12.3□□□□□ -0.44
ATN1-202ENST00000396684 PPP4R1Q8TF05 950 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 GIPC2Q8TF65 315 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 SCLYQ96I15 445 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 TMEM51Q9NW97 253 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 SQORQ9Y6N5 450 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 MCM3APO60318 1980 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 F5H5T6 163 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 CYP2C18P33260 490 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
ATN1-202ENST00000396684 USP41Q3LFD5 358 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 SLC45A4Q5BKX6 768 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 ANKRD20A3Q5VUR7 823 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 NAPEPLDQ6IQ20 393 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 KDELC2Q7Z4H8 507 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 PRUNE1Q86TP1 453 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 NPAS4Q8IUM7 802 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 FUKQ8N0W3 1084 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 TMEM199Q8N511 208 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 SLC35F5Q8WV83 523 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 ART4Q93070 314 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 STAMBPL1Q96FJ0 436 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 CELF6Q96J87 481 aaKnown RBP12.3□□□□□ -0.44
ATN1-202ENST00000396684 KCNK16Q96T55 309 aa12.3□□□□□ -0.44
ATN1-202ENST00000396684 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
ATN1-202ENST00000396684 PPFIA2O75334 1257 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 JCHAINP01591 159 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 ZNF844Q08AG5 666 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 DPYSL3Q14195 570 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 DDR2Q16832 855 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 SPDYCQ5MJ68 293 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 SDHAF4Q5VUM1 108 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 VSTM1Q6UX27 236 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 OSTM1Q86WC4 334 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 MICALL1Q8N3F8 863 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 COLGALT1Q8NBJ5 622 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 CDK5RAP1Q96SZ6 601 aaKnown RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 TTPALQ9BTX7 342 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 MAGEB5Q9BZ81 275 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 FNDC3AQ9Y2H6 1198 aaKnown RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 KCNK1O00180 336 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 EIF3HO15372 352 aaKnown RBP eCLIP12.29□□□□□ -0.44
ATN1-202ENST00000396684 SPAG7O75391 227 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 CCL5P13501 91 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 EPHB3P54753 998 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 OGDHQ02218 1023 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 UBXN11Q5T124 520 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 TMEM130Q8N3G9 435 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 IPMKQ8NFU5 416 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 SPPL2BQ8TCT7 592 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 CLEC4CQ8WTT0 213 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 PDCD6IPQ8WUM4 868 aaKnown RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 TTC17Q96AE7 1141 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 PIDD1Q9HB75 910 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 TBC1D13Q9NVG8 400 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 TMEM59LQ9UK28 342 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 MDM4O15151 490 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 BNIP3LO60238 219 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 OPHN1O60890 802 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 RPL22P35268 128 aaKnown RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 NDUFV1P49821 464 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 TUBP50607 506 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 GEMIN4P57678 1058 aaKnown RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 HTRA3P83110 453 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 TLE2Q04725 743 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 DMTNQ08495 405 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 GEN1Q17RS7 908 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 TIGD7Q6NT04 549 aaPredicted RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 CLEC20AQ6ZU45 233 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 NKD2Q969F2 451 aaPredicted RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 CEP41Q9BYV8 373 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 UPF3AQ9H1J1 476 aaKnown RBP12.29□□□□□ -0.44
ATN1-202ENST00000396684 MARCH2Q9P0N8 246 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 SLC27A5Q9Y2P5 690 aa12.29□□□□□ -0.44
ATN1-202ENST00000396684 RNF103O00237 685 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 SYN3O14994 580 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 SPTLC1O15269 473 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 ANXA9O76027 345 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 POLBP06746 335 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 CD48P09326 243 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 CYP1B1Q16678 543 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 WDTC1Q8N5D0 677 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 USP6NLQ92738 828 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 BRD8Q9H0E9 1235 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
ATN1-202ENST00000396684 MEIS3P2A8K0S8 358 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms