RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SLC35F5Q8WV83 523 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 QKIQ96PU8 341 aaKnown RBP eCLIP19.47■□□□□ 0.718e-10■■■■■ 34.6
CBX1-202ENST00000393408 ERAP1Q9NZ08 941 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 WASF2Q9Y6W5 498 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 LTBP3Q9NS15 1303 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 SPECC1L-ADORA2AF8WAN1 911 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 TM7SF2O76062 418 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 TXNP10599 105 aaKnown RBP19.47■□□□□ 0.71
CBX1-202ENST00000393408 INSRRP14616 1297 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 KDSRQ06136 332 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 SEMA5AQ13591 1074 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 ZRSR2Q15696 482 aaKnown RBP19.47■□□□□ 0.71
CBX1-202ENST00000393408 TBCCQ15814 346 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 NBPF20Q3BBV1 942 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 ZCCHC23Q6ZST2 131 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 ACOT1Q86TX2 421 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 SCUBE1Q8IWY4 988 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 LINC01465Q8N7H1 131 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 UCMAQ8WVF2 138 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 MRPL45Q9BRJ2 306 aaKnown RBP19.47■□□□□ 0.71
CBX1-202ENST00000393408 B3GNT5Q9BYG0 378 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 YIPF3Q9GZM5 350 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 THAP1Q9NVV9 213 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 HESX1Q9UBX0 185 aa19.47■□□□□ 0.71
CBX1-202ENST00000393408 DCAF8L1A6NGE4 600 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 TOMM70O94826 608 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 GSRP00390 522 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 SERPINA6P08185 405 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 DESP17661 470 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 CNTFP26441 200 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 ZNF484Q5JVG2 852 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 KCNT2Q6UVM3 1135 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 CYS1Q717R9 158 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 APLFQ8IW19 511 aaPredicted RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 KRT82Q9NSB4 513 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 SCN1AP35498 2009 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 OTOFQ9HC10 1997 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 DNAJC25-GNG10A0A024R161 153 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 NPTXRO95502 500 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 SLC25A27O95847 323 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 ZFXP17010 805 aaPredicted RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 NR2C2P49116 596 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 ALDH18A1P54886 795 aaKnown RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 DBN1Q16643 649 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 DNAL1Q4LDG9 190 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 STXBP5Q5T5C0 1151 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 STEAP4Q687X5 459 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 POTEAQ6S8J7 498 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 KYAT3Q6YP21 454 aaKnown RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 RFX8Q6ZV50 586 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 ULK2Q8IYT8 1036 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 PPFIBP2Q8ND30 876 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 EBF4Q9BQW3 602 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 C11orf84Q9BUA3 381 aaPredicted RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 MAGEB5Q9BZ81 275 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 GCOM2Q9BZD3 368 aaPredicted RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 DHX35Q9H5Z1 703 aaKnown RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 RGS17Q9UGC6 210 aaPredicted RBP19.46■□□□□ 0.71
CBX1-202ENST00000393408 NME7Q9Y5B8 376 aa19.46■□□□□ 0.71
CBX1-202ENST00000393408 SPDYE5A6NIY4 337 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 SDR42E2A6NKP2 422 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 PRR5-ARHGAP8B1AHC4 643 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 PTPN9P43378 593 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 ARHGAP8P85298 464 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 TRMT5Q32P41 509 aaKnown RBP19.45■□□□□ 0.7
CBX1-202ENST00000393408 NT5DC4Q86YG4 428 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 CCDC33Q8N5R6 958 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 KIF12Q96FN5 646 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 RILPQ96NA2 401 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 PANX3Q96QZ0 392 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 PDGFCQ9NRA1 345 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 MTMR10Q9NXD2 777 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 AKT3Q9Y243 479 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 MAP3K7O43318 606 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 ALDH1A2O94788 518 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 SP100P23497 879 aaPredicted RBP19.45■□□□□ 0.7
CBX1-202ENST00000393408 ATXN1P54253 815 aaKnown RBP19.45■□□□□ 0.7
CBX1-202ENST00000393408 IRX1P78414 480 aaPredicted RBP19.45■□□□□ 0.7
CBX1-202ENST00000393408 FASTKD1Q53R41 847 aaKnown RBP19.45■□□□□ 0.7
CBX1-202ENST00000393408 RIPOR1Q6ZS17 1223 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 MARK2Q7KZI7 788 aaKnown RBP19.45■□□□□ 0.7
CBX1-202ENST00000393408 ZDHHC17Q8IUH5 632 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 KBTBD2Q8IY47 623 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 UNC5BQ8IZJ1 945 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 CENPIQ92674 756 aaPredicted RBP19.45■□□□□ 0.7
CBX1-202ENST00000393408 CLPTM1LQ96KA5 538 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 ANGPTL2Q9UKU9 493 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 EMCNQ9ULC0 261 aa19.45■□□□□ 0.7
CBX1-202ENST00000393408 A6NJR5 290 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 VTNP04004 478 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 ADORA2AP29274 412 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 UBAP2LQ14157 1087 aaKnown RBP19.44■□□□□ 0.7
CBX1-202ENST00000393408 MBLAC2Q68D91 279 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 HEATR6Q6AI08 1181 aaKnown RBP19.44■□□□□ 0.7
CBX1-202ENST00000393408 MYLK4Q86YV6 388 aaPredicted RBP19.44■□□□□ 0.7
CBX1-202ENST00000393408 ZNF778Q96MU6 729 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 CSPG4P5Q96PW8 444 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 KCTD15Q96SI1 283 aaPredicted RBP19.44■□□□□ 0.7
CBX1-202ENST00000393408 SIKE1Q9BRV8 207 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms