RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MAP7D3Q8IWC1 876 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 EPS8L3Q8TE67 593 aaKnown RBP15.53■□□□□ 0.08
MKS1-202ENST00000393119 PRDM5Q9NQX1 630 aaPredicted RBP15.53■□□□□ 0.08
MKS1-202ENST00000393119 TMEM39AQ9NV64 488 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 KANSL3Q9P2N6 904 aa15.53■□□□□ 0.08
MKS1-202ENST00000393119 GOLGA6CA6NDK9 693 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 DNALI1O14645 258 aaPredicted RBP15.52■□□□□ 0.08
MKS1-202ENST00000393119 MCF2LO15068 1137 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 KCNN4O15554 427 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 GOLGA6DP0CG33 693 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 CTCFP49711 727 aaPredicted RBP15.52■□□□□ 0.08
MKS1-202ENST00000393119 DEFB103AP81534 67 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 MSS51Q4VC12 460 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 FUT10Q6P4F1 479 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 RNF19BQ6ZMZ0 732 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 CPT1BQ92523 772 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 LGMNQ99538 433 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 VN1R3Q9BXE9 311 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 RABEP2Q9H5N1 569 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 GOLGA6AQ9NYA3 693 aa15.52■□□□□ 0.08
MKS1-202ENST00000393119 XPO7Q9UIA9 1087 aaKnown RBP15.52■□□□□ 0.08
MKS1-202ENST00000393119 ATXN2Q99700 1313 aaKnown RBP15.52■□□□□ 0.07
MKS1-202ENST00000393119 CXCL10P02778 98 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 COL6A1P12109 1028 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 NUMBP49757 651 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 IRAK1P51617 712 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 ROR1Q01973 937 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 RNASEH2BQ5TBB1 312 aaKnown RBP15.51■□□□□ 0.07
MKS1-202ENST00000393119 PM20D1Q6GTS8 502 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 SYDE1Q6ZW31 735 aaPredicted RBP15.51■□□□□ 0.07
MKS1-202ENST00000393119 CCDC110Q8TBZ0 833 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 FAF2Q96CS3 445 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 ELAC1Q9H777 363 aaKnown RBP15.51■□□□□ 0.07
MKS1-202ENST00000393119 TMBIM4Q9HC24 238 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 ARHGEF4Q9NR80 690 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 TPX2Q9ULW0 747 aaKnown RBP15.51■□□□□ 0.07
MKS1-202ENST00000393119 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.51■□□□□ 0.07
MKS1-202ENST00000393119 VWA8A3KMH1 1905 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 A0A1W2PQH9 124 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 TRIM43BA6NCK2 446 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 MFSD11O43934 449 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 TMEM63AO94886 807 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 TBX18O95935 607 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 RARGP13631 454 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 CSF2RAP15509 400 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 FNBP1LQ5T0N5 605 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 ANKMY2Q8IV38 441 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 DQX1Q8TE96 717 aaKnown RBP15.51■□□□□ 0.07
MKS1-202ENST00000393119 TRIM43Q96BQ3 446 aaPredicted RBP15.51■□□□□ 0.07
MKS1-202ENST00000393119 ZNF670Q9BS34 389 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 TKTL2Q9H0I9 626 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 NINJ2Q9NZG7 142 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 DTLQ9NZJ0 730 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 CTNNAL1Q9UBT7 734 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 TBX21Q9UL17 535 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 STAP1Q9ULZ2 295 aa15.51■□□□□ 0.07
MKS1-202ENST00000393119 AVILO75366 819 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 FBXO21O94952 628 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 HPDP32754 393 aaPredicted RBP15.5■□□□□ 0.07
MKS1-202ENST00000393119 ADRA1BP35368 520 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 BASP1P80723 227 aaKnown RBP15.5■□□□□ 0.07
MKS1-202ENST00000393119 IFFO1Q0D2I5 559 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 LONRF1Q17RB8 773 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 KRT71Q3SY84 523 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 CCDC13Q8IYE1 715 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 RNF139Q8WU17 664 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 DEPDC1BQ8WUY9 529 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 CASP10Q92851 521 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 RBM15Q96T37 977 aaKnown RBP eCLIP15.5■□□□□ 0.07
MKS1-202ENST00000393119 COLEC11Q9BWP8 271 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 ZNF638Q14966 1978 aaKnown RBP15.5■□□□□ 0.07
MKS1-202ENST00000393119 CHD7Q9P2D1 2997 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 TMEM189-UBE2V1I3L0A0 370 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 OPA1O60313 960 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 PSEN1P49768 467 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 YWHAGP61981 247 aaKnown RBP eCLIP15.5■□□□□ 0.07
MKS1-202ENST00000393119 TFDP2Q14188 446 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 DENND2CQ68D51 928 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 KCNT2Q6UVM3 1135 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 TTC13Q8NBP0 860 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 GIPC2Q8TF65 315 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 PRCCQ92733 491 aaPredicted RBP15.5■□□□□ 0.07
MKS1-202ENST00000393119 WDR83Q9BRX9 315 aaKnown RBP15.5■□□□□ 0.07
MKS1-202ENST00000393119 SIK2Q9H0K1 926 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 PCDH9Q9HC56 1237 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 SAYSD1Q9NPB0 183 aa15.5■□□□□ 0.07
MKS1-202ENST00000393119 CSPG5O95196 566 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 CPB1P15086 417 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 VAV1P15498 845 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 LBX1P52954 281 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 IFI35P80217 286 aaPredicted RBP15.49■□□□□ 0.07
MKS1-202ENST00000393119 LMNB2Q03252 620 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 DUSP4Q13115 394 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 MRPL58Q14197 206 aaKnown RBP15.49■□□□□ 0.07
MKS1-202ENST00000393119 CCDC38Q502W7 563 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 SEPT5Q99719 369 aaPredicted RBP15.49■□□□□ 0.07
MKS1-202ENST00000393119 FBXW11Q9UKB1 542 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 NOVA2Q9UNW9 492 aaKnown RBP15.49■□□□□ 0.07
MKS1-202ENST00000393119 FAM169AQ9Y6X4 670 aa15.49■□□□□ 0.07
MKS1-202ENST00000393119 NLRC5Q86WI3 1866 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms