RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PDIK1LQ8N165 341 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 RAB3IL1Q8TBN0 382 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 KHSRPQ92945 711 aaKnown RBP eCLIP11.8□□□□□ -0.525e-7■■■□□ 18
PDCD4-202ENST00000393104 MOCOSQ96EN8 888 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 PTTG2Q9NZH5 202 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 AGO2Q9UKV8 859 aaKnown RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 RBP3P10745 1247 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 EIF4BP23588 611 aaKnown RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 FDFT1P37268 417 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 CSRP3P50461 194 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 EIF3EP60228 445 aaKnown RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 RPL26P61254 145 aaKnown RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 TMPRSS15P98073 1019 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 MS4A2Q01362 244 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 PLCB3Q01970 1234 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 NIPAL4Q0D2K0 466 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 PDE1CQ14123 709 aaPredicted RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 FNDC1Q4ZHG4 1894 aaPredicted RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 XRRA1Q6P2D8 792 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 ELMSAN1Q6PJG2 1045 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 TMEM151AQ8N4L1 468 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 LENG1Q96BZ8 264 aaPredicted RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 ZNF512Q96ME7 567 aaPredicted RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 XAB2Q9HCS7 855 aaKnown RBP11.8□□□□□ -0.52
PDCD4-202ENST00000393104 PACSIN3Q9UKS6 424 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 ITGA11Q9UKX5 1188 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 RNF11Q9Y3C5 154 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 NR2E3Q9Y5X4 410 aa11.8□□□□□ -0.52
PDCD4-202ENST00000393104 COQ9O75208 318 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 IMPDH2P12268 514 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 TNNI1P19237 187 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 EPHX2P34913 555 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 BASP1P80723 227 aaKnown RBP11.79□□□□□ -0.52
PDCD4-202ENST00000393104 DNAJC24Q6P3W2 148 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 PPM1NQ8N819 430 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 SLC7A14Q8TBB6 771 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 SPATA18Q8TC71 538 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 IRGQQ8WZA9 623 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 DTNBP1Q96EV8 351 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 WRNIP1Q96S55 665 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 WWP1Q9H0M0 922 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 GABBR1Q9UBS5 961 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 SMIM31A0A1B0GVY4 71 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 WDR64B1ANS9 1081 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 ALDH1A2O94788 518 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CRTAMO95727 393 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 ARL2P36404 184 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 XIAPP98170 497 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 ABHD15Q6UXT9 468 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CATSPERGQ6ZRH7 1159 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 RBM12BQ8IXT5 1001 aaKnown RBP11.79□□□□□ -0.52
PDCD4-202ENST00000393104 NUP93Q8N1F7 819 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 KLHL23Q8NBE8 558 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 BTBD9Q96Q07 612 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CYP26B1Q9NR63 512 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CXCL11O14625 94 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CALB1P05937 261 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 SNRPAP09012 282 aaKnown RBP11.79□□□□□ -0.52
PDCD4-202ENST00000393104 FSTL1Q12841 308 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CFAP157Q5JU67 520 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 FBXW8Q8N3Y1 598 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 ARNTL2Q8WYA1 636 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CFAP36Q96G28 342 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 TARS2Q9BW92 718 aaKnown RBP11.79□□□□□ -0.52
PDCD4-202ENST00000393104 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 FRMD8P1Q9BZ68 369 aaPredicted RBP11.79□□□□□ -0.52
PDCD4-202ENST00000393104 POLR3FQ9H1D9 316 aaPredicted RBP11.79□□□□□ -0.52
PDCD4-202ENST00000393104 PDZD7Q9H5P4 517 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 SMYD3Q9H7B4 428 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 ZNF696Q9H7X3 374 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 THAP1Q9NVV9 213 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 SLC9A2Q9UBY0 812 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 CCPG1Q9ULG6 757 aa11.79□□□□□ -0.52
PDCD4-202ENST00000393104 STRNO43815 780 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 APOEP02649 317 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MAGEA10P43363 369 aaPredicted RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 GABRB2P47870 512 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 CA9Q16790 459 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 TMEM102Q8N9M5 508 aaPredicted RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 PIWIL2Q8TC59 973 aaKnown RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MCRS1Q96EZ8 462 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 CEP170P1Q96L14 293 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 CENPKQ9BS16 269 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 IMPG2Q9BZV3 1241 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 ZNF358Q9NW07 568 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 GMEB1Q9Y692 573 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 A0A0G2JLL6 359 aaPredicted RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 KCNA4P22459 653 aa11.78□□□□□ -0.52
PDCD4-202ENST00000393104 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 IREB2P48200 963 aaKnown RBP11.78□□□□□ -0.52
PDCD4-202ENST00000393104 HARS2P49590 506 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms