RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 ABHD14A-ACY1A0A1B0GW23 586 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 GOLGA6CA6NDK9 693 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 SMAPO00193 183 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 MYZAPP0CAP1 466 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 GOLGA6DP0CG33 693 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 ZNF135P52742 658 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 SEMA3BQ13214 749 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 GPR17Q13304 367 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 EIF4EBP2Q13542 120 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 SLC29A2Q14542 456 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 LRRC26Q2I0M4 334 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 RTP2Q5QGT7 225 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 HOOK3Q86VS8 718 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 CDKL3Q8IVW4 592 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 BCL7CQ8WUZ0 217 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 TTPALQ9BTX7 342 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 FBXO44Q9H4M3 255 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 CWH43Q9H720 699 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 TMPRSS4Q9NRS4 437 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 GOLGA6AQ9NYA3 693 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 SCML2Q9UQR0 700 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 UPP2O95045 317 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 HSPA8P11142 646 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 AMPD1P23109 780 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 PBX3P40426 434 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 HCAR3P49019 387 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 CTCFP49711 727 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 GBE1Q04446 702 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 SLC10A2Q12908 348 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 DPYSQ14117 519 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 BTBD8Q5XKL5 378 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 BZW1Q7L1Q6 419 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 PPIL6Q8IXY8 311 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 SPPL2BQ8TCT7 592 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 C2orf15Q8WU43 125 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 PRCCQ92733 491 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 PAWRQ96IZ0 340 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 OLFM3Q96PB7 478 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 PGLYRP2Q96PD5 576 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 SMOC2Q9H3U7 446 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 ANLNQ9NQW6 1124 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 IL37Q9NZH6 218 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
SMARCAL1-203ENST00000392128 MTMR11A4FU01 709 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 I6L893 689 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 EEF2KO00418 725 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 TIMP1P01033 207 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 CPB1P15086 417 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 IFFO1Q0D2I5 559 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 IFRD2Q12894 506 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 SLC45A4Q5BKX6 768 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 RSPO2Q6UXX9 243 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 RFX8Q6ZV50 586 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 SCD5Q86SK9 330 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 DNAJC5GQ8N7S2 189 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 NAT8LQ8N9F0 302 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 CPT1BQ92523 772 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 TOP1MTQ969P6 601 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 ATP6V1G3Q96LB4 118 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 QKIQ96PU8 341 aaKnown RBP eCLIP11.85□□□□□ -0.513e-6■■■■□ 24.8
SMARCAL1-203ENST00000392128 TMEM109Q9BVC6 243 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 DTLQ9NZJ0 730 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM92AA1XBS5 289 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 HACD1B0YJ81 288 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 KCNN4O15554 427 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 IRAK2O43187 625 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 CREB3O43889 395 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 TTC4O95801 387 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 CAPN2P17655 700 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 RBL1P28749 1068 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 ACTN2P35609 894 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 GPR15P49685 360 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 GYS2P54840 703 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 PAFAH1B3Q15102 231 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 TERF2Q15554 542 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 DDR2Q16832 855 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 TAS1R1Q7RTX1 841 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 CROCCP2Q86T23 111 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 MON1AQ86VX9 555 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 ARHGAP18Q8N392 663 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 ATAD1Q8NBU5 361 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 PWWP2AQ96N64 755 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 RBM15Q96T37 977 aaKnown RBP eCLIP11.85□□□□□ -0.512e-7■■■■□ 24.7
SMARCAL1-203ENST00000392128 TKTL2Q9H0I9 626 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 ETNK2Q9NVF9 386 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 PAK5Q9P286 719 aa11.85□□□□□ -0.51
SMARCAL1-203ENST00000392128 KIAA0355O15063 1070 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 DCLK1O15075 740 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 AMHP03971 560 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 SHBGP04278 402 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 BRMS1LQ5PSV4 323 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms