RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ALG1LQ6GMV1 187 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 DENND5AQ6IQ26 1287 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RETSATQ6NUM9 610 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TAPT1Q6NXT6 567 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF529Q6P280 563 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 Q6P435 159 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF790Q6PG37 636 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM65Q6PI78 240 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 LMBR1LQ6UX01 489 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RANBP10Q6VN20 620 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 BRD3OSQ6XYD6 125 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 UNC5AQ6ZN44 842 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 DCDC5Q6ZRR9 648 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 LINC00336Q6ZUF6 198 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GPRIN3Q6ZVF9 776 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 Q6ZWC4 215 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 INTS8Q75QN2 995 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PARS2Q7L3T8 475 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 KRTAP19-3Q7Z4W3 81 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 BCDIN3DQ7Z5W3 292 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RTN4RL1Q86UN2 441 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NFE4Q86UQ8 179 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SKAP1Q86WV1 359 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MCF2L2Q86YR7 1114 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MMAAQ8IVH4 418 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 APLFQ8IW19 511 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GLB1L2Q8IW92 636 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM9AQ8IZU1 332 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 DSELQ8IZU8 1212 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CADM3Q8N126 398 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 C11orf42Q8N5U0 333 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 METTL27Q8N6F8 245 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FITM2Q8N6M3 262 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PNPLA1Q8N8W4 532 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM145Q8NBT3 493 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NSUN7Q8NE18 718 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PPHLN1Q8NEY8 458 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 OR13A1Q8NGR1 328 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 OR2T6Q8NHC8 308 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MBD3L2Q8NHZ7 208 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ADAMTS16Q8TE57 1224 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NPIPB3Q92617 1050 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 INPP5DQ92835 1189 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ERCC4Q92889 916 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 OSBP2Q969R2 916 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM104AQ969W3 186 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PPP1R14AQ96A00 147 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM136AQ96C01 138 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CTHRC1Q96CG8 243 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PHYHIPLQ96FC7 376 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TRMT61AQ96FX7 289 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 URB1-AS1Q96HZ7 61 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MRGPRX3Q96LB0 322 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM74Q96NL1 305 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF385AQ96PM9 386 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TBX15Q96SF7 602 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 APBA2Q99767 749 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GDF15Q99988 308 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NOL10Q9BSC4 688 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SOX7Q9BT81 388 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 HTATIP2Q9BUP3 242 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MRI1Q9BV20 369 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PINK1Q9BXM7 581 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TLR10Q9BXR5 811 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RSPO3Q9BXY4 272 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FGFBP2Q9BYJ0 223 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RBCK1Q9BYM8 510 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PUS3Q9BZE2 481 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ISCUQ9H1K1 167 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MTG2Q9H4K7 406 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TUT1Q9H6E5 874 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GAREM1Q9H706 876 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 IPPKQ9H8X2 491 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PANK3Q9H999 370 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PATZ1Q9HBE1 687 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SGK2Q9HBY8 427 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC24A3Q9HC58 644 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PPANQ9NQ55 473 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ANO2Q9NQ90 1003 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CCM2LQ9NUG4 571 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FBXO34Q9NWN3 711 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM118AQ9NWS6 357 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 C2orf42Q9NWW7 574 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ASIC5Q9NY37 505 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MOCS1Q9NZB8 636 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CTTNBP2NLQ9P2B4 639 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF319Q9P2F9 582 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 USP35Q9P2H5 1018 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CPNE7Q9UBL6 633 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 APEX2Q9UBZ4 518 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ARMCX3Q9UH62 379 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CPA4Q9UI42 421 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZMYND8Q9ULU4 1186 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RAB26Q9ULW5 256 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 USP18Q9UMW8 372 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 EXOGQ9Y2C4 368 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 STXBP5LQ9Y2K9 1186 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CARHSP1Q9Y2V2 147 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SUPT16HQ9Y5B9 1047 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms