RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ZNF75CPQ92670 426 aaPredicted RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 CD101Q93033 1021 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 ZNF560Q96MR9 790 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 ADAM2Q99965 735 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 SYT11Q9BT88 431 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 XYLT2Q9H1B5 865 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 IARS2Q9NSE4 1012 aaKnown RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 DONSONQ9NYP3 566 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 UBA6A0AVT1 1052 aaPredicted RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 E9PBE3 544 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 KLHL41O60662 606 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 ENTPD5O75356 428 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 TRPA1O75762 1119 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 METTL18O95568 372 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 CLCNKBP51801 687 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 AQP5P55064 265 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 EFEMP1Q12805 493 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 SIX1Q15475 284 aaPredicted RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 DDR2Q16832 855 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 PREPLQ4J6C6 727 aaPredicted RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 BOLA3Q53S33 107 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 AP1ARQ63HQ0 302 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 OLFML2BQ68BL8 750 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 TSHZ1Q6ZSZ6 1077 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 SMC1BQ8NDV3 1235 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 SCAMP5Q8TAC9 235 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 RUBCNQ92622 972 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 EXOC2Q96KP1 924 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 RNF157Q96PX1 679 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 CYP2S1Q96SQ9 504 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 OMDQ99983 421 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 SYT15Q9BQS2 421 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 CHST12Q9NRB3 414 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 BFARQ9NZS9 450 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 ST3GAL5Q9UNP4 418 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 NDC80O14777 642 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 CIB2O75838 187 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 BEST1O76090 585 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 KRT16P08779 473 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 ABCD1P33897 745 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 GPD2P43304 727 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 MMP13P45452 471 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 MORF4L2Q15014 288 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 DLG2Q15700 870 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 LDB1Q86U70 411 aaPredicted RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 PCDH19Q8TAB3 1148 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 PCDH18Q9HCL0 1135 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 CRCPO75575 148 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 LSM8O95777 96 aaKnown RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 SNAI1O95863 264 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 THP07101 528 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 COPS2P61201 443 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 YWHAZP63104 245 aaKnown RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 TAP1Q03518 808 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 TRIM32Q13049 653 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 THOC5Q13769 683 aaKnown RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 CDKL3Q8IVW4 592 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 CD302Q8IX05 232 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 EFHBQ8N7U6 833 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 GIPC2Q8TF65 315 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 SRPK1Q96SB4 655 aaKnown RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 ROPN1BQ9BZX4 212 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 ROPN1Q9HAT0 212 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 PAK5Q9P286 719 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 PGAP2Q9UHJ9 254 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 ITGA9Q13797 1035 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 COL9A2Q14055 689 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 SNX17Q15036 470 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 PDCD2Q16342 344 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 CEP128Q6ZU80 1094 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 PLD5Q8N7P1 536 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDR1-227ENST00000376570 TKTL2Q9H0I9 626 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 TSPYL2Q9H2G4 693 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 IPPQ9Y573 584 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 AIM2O14862 343 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 APOC2P02655 101 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 FGFR1P11362 822 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 TGM2P21980 687 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 ZNF143P52747 638 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 SOX4Q06945 474 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 ZNF268Q14587 947 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 USP10Q14694 798 aaKnown RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 VWA5B1Q5TIE3 1220 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 PLPPR4Q7Z2D5 763 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 ZNF572Q7Z3I7 529 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 SPATA2LQ8IUW3 424 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 ALKBH8Q96BT7 664 aaKnown RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 CLPTM1LQ96KA5 538 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 RAB3IPQ96QF0 476 aaPredicted RBP12.04□□□□□ -0.48
DDR1-227ENST00000376570 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 EPB41L4BQ9H329 900 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 FZD8Q9H461 694 aa12.04□□□□□ -0.48
DDR1-227ENST00000376570 TASP1Q9H6P5 420 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms