RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NCLNQ969V3 563 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 HIST1H2AHQ96KK5 128 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 HIST1H2AJQ99878 128 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 H2AFJQ9BTM1 129 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 DRC3Q9H069 523 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 CES2O00748 559 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 TSPAN1O60635 241 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 FKTNO75072 461 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 ANP32DO95626 131 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 MMP8P22894 467 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 MGAT1P26572 445 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 ATXN3P54252 364 aaPredicted RBP18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 CRADDP78560 199 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 AMPD2Q01433 879 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 HSP90AA5PQ58FG0 334 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 TRPM8Q7Z2W7 1104 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 TTYH3Q9C0H2 523 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 SUPT3HB4E1H0 165 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 TRIM66O15016 1216 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 SUPT3HO75486 399 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 ZNF844Q08AG5 666 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 POLD3Q15054 466 aaPredicted RBP18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 TMEM192Q8IY95 271 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 MYCBPAPQ8TBZ2 947 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 SPATA17Q96L03 361 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 NTPCRQ9BSD7 190 aaKnown RBP18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 NAT9Q9BTE0 207 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 CYP4F12Q9HCS2 524 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 NINJ2Q9NZG7 142 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 SDK1Q7Z5N4 2213 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 DUSP11O75319 330 aaKnown RBP18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 ABCG1P45844 678 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 RHOAP61586 193 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 PTK6Q13882 451 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 TIGD7Q6NT04 549 aaPredicted RBP18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 KDM7AQ6ZMT4 941 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 RNF217Q8TC41 542 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 AENQ8WTP8 325 aaKnown RBP18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 USP6NLQ92738 828 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 MYLPFQ96A32 169 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 SERPINB11Q96P15 392 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 Q9H521 79 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 CD274Q9NZQ7 290 aa18.49■□□□□ 0.55
PTPDC1-202ENST00000375360 ZWINTO95229 277 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 OR4Q2P0C623 313 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 CRHR2Q13324 411 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 DPYSL3Q14195 570 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 SGO1Q5FBB7 561 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 LGI2Q8N0V4 545 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 LRRC52Q8N7C0 313 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 ADGRA3Q8IWK6 1321 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 CICQ96RK0 1608 aaPredicted RBP18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 PYGLP06737 847 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 ACAP1Q15027 740 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 SPDYAQ5MJ70 313 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 APOBEC3GQ9HC16 384 aaKnown RBP18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 WDR27A2RRH5 827 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 EIF4E1BA6NMX2 242 aaKnown RBP18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 HMOX2P30519 316 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 SATB1Q01826 763 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 PRKCZQ05513 592 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 MPP3Q13368 585 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 PLD1Q13393 1074 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 SH3D19Q5HYK7 790 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 SLC26A7Q8TE54 656 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 ATP13A1Q9HD20 1204 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 GDF3Q9NR23 364 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 ZNF446Q9NWS9 450 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 DUOX1Q9NRD9 1551 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 GRK4P32298 578 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 PTPN7P35236 360 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 PGM1P36871 562 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 FLT3P36888 993 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 MBTD1Q05BQ5 628 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 SLC10A6Q3KNW5 377 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 C6orf10Q5SRN2 563 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 IFNEQ86WN2 208 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 MRPL9Q9BYD2 267 aaKnown RBP18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 AJAP1Q9UKB5 411 aaPredicted RBP18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 ADGRA2Q96PE1 1338 aa18.48■□□□□ 0.55
PTPDC1-202ENST00000375360 C2orf81A6NN90 581 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 SUPT7LO94864 414 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 ENO3P13929 434 aaPredicted RBP18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 GOT1P17174 413 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 CAPRIN1Q14444 709 aaKnown RBP18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 RASIP1Q5U651 963 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 PIP4K2CQ8TBX8 421 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 PRDM12Q9H4Q4 367 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 RRN3Q9NYV6 651 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 CTNNAL1Q9UBT7 734 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 COG5Q9UP83 839 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 GON4LQ3T8J9 2241 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 MRNIPQ6NTE8 343 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 DTX3LQ8TDB6 740 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 NCAM2O15394 837 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 HOXC6P09630 235 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 HSPA8P11142 646 aaKnown RBP18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 C16orf59Q7L2K0 433 aa18.47■□□□□ 0.55
PTPDC1-202ENST00000375360 UTP6Q9NYH9 597 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms