RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 YME1L1Q96TA2 773 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 ADI1Q9BV57 179 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 FANCEQ9HB96 536 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 VPS4BO75351 444 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 CYP2F1P24903 491 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 SREBF1P36956 1147 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 RAP1GAPP47736 663 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 PRKAA1Q13131 559 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 PKN1Q16512 942 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 NFIL3Q16649 462 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 PAN2Q504Q3 1202 aaKnown RBP11.83□□□□□ -0.52
VCL-202ENST00000372755 AGKQ53H12 422 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 LPCAT1Q8NF37 534 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 ANKRD6Q9Y2G4 727 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 JCADQ9P266 1359 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 PLEKP08567 350 aaPredicted RBP11.83□□□□□ -0.52
VCL-202ENST00000372755 RAB27AP51159 221 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 TKTL1P51854 596 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 CDH17Q12864 832 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 TRIM25Q14258 630 aaKnown RBP11.83□□□□□ -0.52
VCL-202ENST00000372755 MYBPC2Q14324 1141 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 FAM228AQ86W67 206 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 FAM131BQ86XD5 332 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 KYQ8NBH2 561 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 HDHD2Q9H0R4 259 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 KANSL3Q9P2N6 904 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 SNX8Q9Y5X2 465 aa11.83□□□□□ -0.52
VCL-202ENST00000372755 ENDOD1O94919 500 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 BGNP21810 368 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TKTP29401 623 aaKnown RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 PTPN11Q06124 597 aaPredicted RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 CRYMQ14894 314 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 ERMARDQ5T6L9 678 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 MARC1Q5VT66 337 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PTAR1Q7Z6K3 402 aaPredicted RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 MTDHQ86UE4 582 aaKnown RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 ZDHHC17Q8IUH5 632 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 SERAC1Q96JX3 654 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CIPCQ9C0C6 399 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 KLHL25Q9H0H3 589 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TET3O43151 1660 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CLPTM1O96005 669 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 SERPINF2P08697 491 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PIK3R1P27986 724 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CRABP2P29373 138 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 NOS3P29474 1203 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CCR1P32246 355 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 SCTRP47872 440 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 MMP14P50281 582 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 GIT2Q14161 759 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TRMT5Q32P41 509 aaKnown RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 HLA-DQA1Q5Y7H0 255 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PCNX4Q63HM2 1172 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CCDC149Q6ZUS6 474 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 EID3Q8N140 333 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 LINC00116Q8NCU8 138 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 RXFP2Q8WXD0 754 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TMEM159Q96B96 161 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CPB2Q96IY4 423 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TMEM121Q9BTD3 319 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 RAD21L1Q9H4I0 556 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 NMRAL1Q9HBL8 299 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 GPRC5CQ9NQ84 441 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PIPSLA2A3N6 862 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 H7C0S8 307 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 MAP3K6O95382 1288 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TRIQKQ629K1 86 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 BDH2Q9BUT1 245 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 FBXO44Q9H4M3 255 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PCDH9Q9HC56 1237 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 SENP2Q9HC62 589 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 TMEM51Q9NW97 253 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PCDHB12Q9Y5F1 795 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 ATG7O95352 703 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 RPN2P04844 631 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 FLT3P36888 993 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 SCNN1BP51168 640 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 ERVK-24P63145 666 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PREPLQ4J6C6 727 aaPredicted RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 STARD8Q92502 1023 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 MAGED4Q96JG8 741 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 APOL2Q9BQE5 337 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 ROGDIQ9GZN7 287 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 SLITRK2Q9H156 845 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 CISHQ9NSE2 258 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 THG1LQ9NWX6 298 aaKnown RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 TMEM191CA6NGB0 347 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 PCDH8O95206 1070 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 ZNF7P17097 686 aaPredicted RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 DSG3P32926 999 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 NPY2RP49146 381 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 HIRAP54198 1017 aaPredicted RBP11.82□□□□□ -0.52
VCL-202ENST00000372755 GNA13Q14344 377 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 CCDC157Q569K6 752 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 SETD9Q8NE22 299 aa11.82□□□□□ -0.52
VCL-202ENST00000372755 UTP15Q8TED0 518 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms