RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 NME8Q8N427 588 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 HTR3CQ8WXA8 447 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 EBNA1BP2Q99848 306 aaKnown RBP29.92■■■□□ 2.38
SSBP3-204ENST00000371320 XAB2Q9HCS7 855 aaKnown RBP29.92■■■□□ 2.38
SSBP3-204ENST00000371320 RCOR3Q9P2K3 495 aaPredicted RBP29.92■■■□□ 2.38
SSBP3-204ENST00000371320 CYB561D2O14569 222 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 DAB1O75553 588 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 DGKIO75912 1065 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 PTPN1P18031 435 aaKnown RBP29.92■■■□□ 2.38
SSBP3-204ENST00000371320 ACAT1P24752 427 aaKnown RBP29.92■■■□□ 2.38
SSBP3-204ENST00000371320 SEMA5AQ13591 1074 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 BZW1Q7L1Q6 419 aaKnown RBP29.92■■■□□ 2.38
SSBP3-204ENST00000371320 CHSY1Q86X52 802 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 OLFM3Q96PB7 478 aa29.92■■■□□ 2.38
SSBP3-204ENST00000371320 VGLL3A8MV65 326 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 HACD1B0YJ81 288 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 COPEO14579 308 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 NPR3P17342 541 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 MRPS5P82675 430 aaKnown RBP29.91■■■□□ 2.38
SSBP3-204ENST00000371320 CCL14Q16627 93 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 PSTKQ8IV42 348 aaKnown RBP29.91■■■□□ 2.38
SSBP3-204ENST00000371320 ZNF398Q8TD17 642 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 PTPRN2Q92932 1015 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 TTC17Q96AE7 1141 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 KATNAL1Q9BW62 490 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 IQCGQ9H095 443 aaKnown RBP29.91■■■□□ 2.38
SSBP3-204ENST00000371320 SMYD2Q9NRG4 433 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 NEFHP12036 1026 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 LRPAP1P30533 357 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 SLC8A1P32418 973 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 DENND5BQ6ZUT9 1274 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 GSDMBQ8TAX9 411 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 LRRC4Q9HBW1 653 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 ARHGEF4Q9NR80 690 aa29.91■■■□□ 2.38
SSBP3-204ENST00000371320 C2CD2LO14523 706 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 PTGESO14684 152 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 GNAT1P11488 350 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 OVGP1Q12889 678 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 WSCD1Q658N2 575 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 MPP5Q8N3R9 675 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 TSSK1BQ9BXA7 367 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 PRDM16Q9HAZ2 1276 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 STK38LQ9Y2H1 464 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 NR2E3Q9Y5X4 410 aa29.9■■■□□ 2.38
SSBP3-204ENST00000371320 SYNJ2BP-COX16A0A087WUM0 186 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 BEST1O76090 585 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 VAV1P15498 845 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 NOS2P35228 1153 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 SARNPP82979 210 aaKnown RBP29.89■■■□□ 2.38
SSBP3-204ENST00000371320 ANKRD20A2Q5SQ80 823 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 ANKRD20A1Q5TYW2 823 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 ANKRD20A3Q5VUR7 823 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 NLRP9Q7RTR0 991 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 CEP57Q86XR8 500 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 ZFP42Q96MM3 310 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 SRPK1Q96SB4 655 aaKnown RBP29.89■■■□□ 2.38
SSBP3-204ENST00000371320 LGMNQ99538 433 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 MED10Q9BTT4 135 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 COX16Q9P0S2 106 aa29.89■■■□□ 2.38
SSBP3-204ENST00000371320 A0A0A0MRY4 1105 aa29.89■■■□□ 2.37
SSBP3-204ENST00000371320 GRIA1P42261 906 aa29.89■■■□□ 2.37
SSBP3-204ENST00000371320 PITX1P78337 314 aaPredicted RBP29.89■■■□□ 2.37
SSBP3-204ENST00000371320 PAQR9Q6ZVX9 377 aa29.89■■■□□ 2.37
SSBP3-204ENST00000371320 SIX6OS1Q8N1H7 587 aa29.89■■■□□ 2.37
SSBP3-204ENST00000371320 KCTD13Q8WZ19 329 aa29.89■■■□□ 2.37
SSBP3-204ENST00000371320 SPATA13Q96N96 652 aa29.89■■■□□ 2.37
SSBP3-204ENST00000371320 TRIM56Q9BRZ2 755 aaKnown RBP29.89■■■□□ 2.37
SSBP3-204ENST00000371320 PCNTO95613 3336 aa29.89■■■□□ 2.37
SSBP3-204ENST00000371320 H3BRJ5 948 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 KRT38O76015 456 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 FDFT1P37268 417 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 NDUFV1P49821 464 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 OTUD1Q5VV17 481 aaPredicted RBP29.88■■■□□ 2.37
SSBP3-204ENST00000371320 RNF139Q8WU17 664 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 APBB2Q92870 758 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 NT5C3BQ969T7 300 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 PPP1R10Q96QC0 940 aaKnown RBP29.88■■■□□ 2.37
SSBP3-204ENST00000371320 DCTN4Q9UJW0 460 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 STAP1Q9ULZ2 295 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 PCDHA11Q9Y5I1 949 aa29.88■■■□□ 2.37
SSBP3-204ENST00000371320 MFSD11O43934 449 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 UGT1A9O60656 530 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 CSH1P0DML2 217 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 CSH2P0DML3 217 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 TARSP26639 723 aaKnown RBP29.87■■■□□ 2.37
SSBP3-204ENST00000371320 PLEKHG4Q58EX7 1191 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 MDH1BQ5I0G3 518 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 TRMT10BQ6PF06 316 aaKnown RBP29.87■■■□□ 2.37
SSBP3-204ENST00000371320 NPY6RQ99463 290 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 TRIM55Q9BYV6 548 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 UGT1A7Q9HAW7 530 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 UGT1A10Q9HAW8 530 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 UGT1A8Q9HAW9 530 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 TMPRSS4Q9NRS4 437 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 TRIP12Q14669 1992 aaPredicted RBP29.87■■■□□ 2.37
SSBP3-204ENST00000371320 FAM159BA6NKW6 160 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 M0QYT0 321 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 CYP2B6P20813 491 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 SERPINB4P48594 390 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 CLEC20AQ6ZU45 233 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms